Pairwise Alignments

Query, 199 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 183 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 89.7 bits (221), Expect = 3e-23
 Identities = 54/161 (33%), Positives = 84/161 (52%)

Query: 21  EQAFSVLFFKYLPVLQIFATKFTKSDDAAEEIIQDSFLRVWLNRDKLAEVDNVKAYLYKY 80
           E+ F  L+  Y   +   A   T   +AA+EI+QD FL +W  R+ L    ++K YL++ 
Sbjct: 19  EKEFEELYTMYSRAMISMAHNRTGDREAAKEIVQDVFLSLWERREGLRVHGSIKHYLFRA 78

Query: 81  VSNECLSYLRKKLKEDRVVDAFTAKQQNSHNSTVETINLNEVTKIIAIAVEKLPDQRKNI 140
           V  E + + RKK   ++              ST E +  NE++  I+  VEKLP Q + +
Sbjct: 79  VKLEIIDHYRKKNSREKHQHYLVENAGRWSRSTEERVLFNELSGSISALVEKLPSQCREV 138

Query: 141 YQLSRRDGKTIPEIAEILNISPNTVKNALVTALKSIRIQLD 181
           Y+LSR  G    EIA  L ++  TV++ L  ALK +R ++D
Sbjct: 139 YRLSREKGLNNKEIALSLTVTEKTVESHLTKALKFLRSRID 179