Pairwise Alignments

Query, 199 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 187 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 91.7 bits (226), Expect = 8e-24
 Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 1/161 (0%)

Query: 20  DEQAFSVLFFKYLPVLQIFATKFTKSDDAAEEIIQDSFLRVWLNRDKLAEVDNVKAYLYK 79
           DEQ F   F  +   L  +A    K +D AEEI+Q  FL++W  RD +    ++KAYLY+
Sbjct: 14  DEQLFESTFKSHFQALYAYACMLVKDEDEAEEIVQTVFLKIWEKRDSITIASSLKAYLYQ 73

Query: 80  YVSNECLSYLRKKLKEDRVVDAFTAKQQNSHNSTVETINLNEVTKIIAIAVEKLPDQRKN 139
            V    ++YLR +  + +  D  T  Q N     ++  + +E+   +  A+++LP++ + 
Sbjct: 74  MVYRNSMNYLRHQKVKQKHHD-ITLHQANDAGPQMDEGHDHELMDALKNALQELPEKCRK 132

Query: 140 IYQLSRRDGKTIPEIAEILNISPNTVKNALVTALKSIRIQL 180
           ++ LSR +     EIA+ L IS  TV+  +  ALK +RI L
Sbjct: 133 VFLLSRYESLKYQEIADRLGISVKTVETHMGKALKHLRIAL 173