Pairwise Alignments

Query, 424 a.a., deoxyribodipyrimidine photolyase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 479 a.a., DNA photolyase from Agrobacterium fabrum C58

 Score =  122 bits (306), Expect = 2e-32
 Identities = 110/409 (26%), Positives = 173/409 (42%), Gaps = 40/409 (9%)

Query: 5   ILVWFRNDLRLHDNEMLVEAIAKSDSILPVYILDRRSFGETKYGTLKTGNIRAQFILESV 64
           ++VWFR DLRL DN  L+ A+     ++PVYI ++ +      G L  G  +  ++  S+
Sbjct: 8   VIVWFRKDLRLSDNLALLAAVEHGGPVIPVYIREKSA------GPL--GGAQEWWLHHSL 59

Query: 65  LGLRNSLKQIGGNLLIAEGNPEDIIPQLAQEYEITEVYHHREVAREETHVSTLVENALWK 124
             L +SL++ GG L++A G+ E I+  L  E     V  +R            ++  L  
Sbjct: 60  AALSSSLEKAGGRLVLASGDAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRD 119

Query: 125 LRINLKHFIGHTLYNKEDLPFPIKDIPDAFNQFKKKIERDSIIKPCFLAPDRINVAEVID 184
             + ++ F G  L+    L          +  F + +E           P  +   +V  
Sbjct: 120 DGLTVRSFSGQLLHEPSRLQTKSGGPYRVYTPFWRALEGSDEPHAPADPPKSLTAPKV-- 177

Query: 185 WGILPSLADLDLLPQQKDQRADFE--FVGGEAEGLAHLQKVI----VAMQQAATTKNLIL 238
           W     L++  LLP + D   DF   +  GE   L  L   I       ++         
Sbjct: 178 WPKSEKLSNWKLLPTKPDWAKDFSDIWTPGETGALDKLDDFIDGALKGYEEGRDFPAKPA 237

Query: 239 ASKLSAWLAMGSLSPRKVYWEIKKMEGVPNTKAMFNHILLG--------LLWRDY---FR 287
            S LS  LA G +SP  V+           TK +  HI           ++WR++     
Sbjct: 238 TSLLSPHLAAGEISPAAVWHA---------TKGLSRHIASNDISRFRKEIVWREFCYHLL 288

Query: 288 FMFKKYGNTFFSPDGFGSQGLIDIVNEQDNFNKWKNAQTGFAVVDAVMTELNQTGFISNI 347
           F F + G   ++ D F +    D   ++ +F  W    TG+ +VDA M +L Q G + N 
Sbjct: 289 FHFPELGEKNWN-DSFDAFSWRD---DEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNR 344

Query: 348 ARQTAALYLINNLEVSWIFGAAYFEEKLIDYNPASNWGNWANVAGVGND 396
            R   A +LI +L + W  G  +F + L+D +PASN  NW  VAG G D
Sbjct: 345 VRMIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGAD 393