Pairwise Alignments

Query, 243 a.a., rhomboid family intramembrane serine protease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 410 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 59/230 (25%)

Query: 5   YIPPVVKNLLIINILFFVASYLLTTLHLDDRLAVYYFDSPKF-------ELWQPISYMFM 57
           ++ P++ NL   N+L FVA  LL    LD   A        F       E W+ ++ MF+
Sbjct: 64  FVTPILLNL---NLLVFVAGALLGVHVLDPDAARLVELGANFGPYTLTGEWWRLLTSMFL 120

Query: 58  HGGIAHIFFNMFALYSFGSLLESRWGGKKFIIFYFITGL-GALALQWAVQAYEVHQIIGS 116
           HGG+ H+ FNM AL + G+ LE+  G  +F++ Y + GL G++   W             
Sbjct: 121 HGGLVHLLFNMVALVNIGTQLEALVGRVQFVLAYVLCGLAGSVVSLW------------- 167

Query: 117 ATNNGKINLTALFQGEFNTQQLSMAQAVTLRSIYFGGMVGASGAIFGLLVAFGMLYPNAE 176
                           + + ++S++             VGASGAIFG+   FGML     
Sbjct: 168 ----------------WTSPEVSVS-------------VGASGAIFGM---FGML---LM 192

Query: 177 LLIMFIPVPVKAKYIIPIYILVELSLGVAQFEGDSIAHYAHLGGALIGFI 226
           +L++   +  K+K  I   ++  + + +A      I + AH+GG L G +
Sbjct: 193 VLLLERELDWKSKRAILGNMVFVIGINLAYGMRGGIDNAAHIGGLLAGVV 242