Pairwise Alignments

Query, 243 a.a., rhomboid family intramembrane serine protease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 516 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 50/196 (25%)

Query: 41  FDSPKFELWQPISYMFMHGGIAHIFFNMFALYSFGSLLESRWGGKKFIIFYFITGLGALA 100
           F+    E W+  + +F+HGG+ H+F N+F L    SLLE   G  + II + + G+ A  
Sbjct: 359 FEVVNGEYWRLFTSIFIHGGLMHLFMNLFGLGLGASLLEGILGRTQLIISFIVCGILA-- 416

Query: 101 LQWAVQAYEVHQIIGSATNNGKINLTALFQGEFNTQQLSMAQAVTLRSIYFGGMVGASGA 160
                                  ++ +++  E NT                   VGASGA
Sbjct: 417 -----------------------SIASIYWHE-NTVS-----------------VGASGA 435

Query: 161 IFGLLVAFGMLYPNAELLIMFIPVPVKAKYIIPIYILVELSLGVAQFEG-DSIAHYAHL- 218
           IFGL   +G++   A  +    P  ++    + + +   LSL      G D+ AH+  L 
Sbjct: 436 IFGL---YGLIL--AFTVFKIYPTHMRGMTWMLLGLYAGLSLLFGFLGGIDNAAHFGGLI 490

Query: 219 GGALIGFILVKIWKDK 234
            G ++G IL+ I K+K
Sbjct: 491 SGFILGGILILIEKEK 506