Pairwise Alignments

Query, 243 a.a., rhomboid family intramembrane serine protease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 306 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 66/236 (27%), Positives = 98/236 (41%), Gaps = 49/236 (20%)

Query: 13  LLIINILFFVASYLLTT-LHLDDRLAVY-----YFDSPK------FELWQPISYMFMHGG 60
           LL IN+L F+   +L   L +    A+Y     YF  P        + W   +YMFMH G
Sbjct: 23  LLAINLLVFLVFLVLRVFLTISGEGALYQQLLSYFMMPAEVSRIITQPWSIFTYMFMHEG 82

Query: 61  IAHIFFNMFALYSFGSLLESRWGGKKFIIFYFITGLGALALQWAVQAYEVHQIIGSATNN 120
           I HI FNM  LY FG L++   G +K    Y + GL    L   V  Y V          
Sbjct: 83  IFHILFNMLFLYWFGLLVQEYLGSRKLANLYILGGLAGAVLY--VIMYNV---------- 130

Query: 121 GKINLTALFQGEFNTQQLSMAQAVTLRSIYFGGMVGASGAIFGLLVAFGMLYPNAELLIM 180
                       +  +Q   A            M+GAS  ++ ++V    L P+    ++
Sbjct: 131 ----------APYFIEQRDAAL-----------MLGASAGVYAIVVGAATLTPDTTFHLL 169

Query: 181 FIPVPVKAKYIIPIYILVELSLGVAQFEGDSIAHYAHLGGALIGFILVKIWKDKND 236
            +  PVK KYI   Y+++  +       G  +   AHLGGA IG++ + + +   D
Sbjct: 170 LLG-PVKIKYIAIFYVVIAFANSTGANAGGEL---AHLGGAAIGYLYITMLRKGTD 221