Pairwise Alignments

Query, 243 a.a., rhomboid family intramembrane serine protease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 263 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  160 bits (404), Expect = 3e-44
 Identities = 97/261 (37%), Positives = 143/261 (54%), Gaps = 29/261 (11%)

Query: 6   IPPVVKNLLIINI-LFFVASYLLTTLHLDDRLAVYYFDSPKFELWQPISYMFMHGGIAHI 64
           + PVVKNLL+IN+ L+ VAS+LL    LD   A+YY +S  F  +Q ++YMFMH G+ H+
Sbjct: 5   LTPVVKNLLLINVGLYVVASFLLP--QLDGLFALYYIESKYFMPFQFLTYMFMHAGLWHL 62

Query: 65  FFNMFALYSFGSLLESRWGGKKFIIFYFITGLGALALQWAVQAYEVHQI---IGSATNNG 121
             NMF L+ FG LLE   G KK +  + + G+GA  L     A++++Q+   + +  NN 
Sbjct: 63  ISNMFGLFIFGPLLEQFLGPKKLLTLWMVCGVGAGVLYSGYTAFQMNQLNQKVETFYNNP 122

Query: 122 KINLTALFQGE---------------FNTQQLSMAQAVTLRSIYFG--------GMVGAS 158
              +   F  +               F+    +       +SI            MVGAS
Sbjct: 123 DPEVFNQFVSDNSYMFNNSVYDFIDKFSRDPSNETYVQNAKSIMNNIRDQKSNIPMVGAS 182

Query: 159 GAIFGLLVAFGMLYPNAELLIMFIPVPVKAKYIIPIYILVELSLGVAQFEGDSIAHYAHL 218
           GA+FG+LVAFGML+PN +L ++F P+P+KAKY++  Y L  +   +     D++AH+AH 
Sbjct: 183 GALFGVLVAFGMLFPNTQLFLLFPPMPIKAKYLVLFYGLYTVYNIIVNNPTDNVAHFAHF 242

Query: 219 GGALIGFILVKIWKDKNDTFY 239
            G +IG ILV  WK    +FY
Sbjct: 243 SGLIIGAILVTFWKKDRTSFY 263