Pairwise Alignments

Query, 243 a.a., rhomboid family intramembrane serine protease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 257 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 51/183 (27%)

Query: 52  ISYMFMHGGIAHIFFNMFALYSFGSLLESRWGGKKFIIFYFITGLGALALQWAVQAYEVH 111
           ++Y F+H    H+  NM  L+ FG  +E   G  +F+IFY +  +               
Sbjct: 77  VTYAFLHLDFWHLAGNMLFLWVFGDNVEDALGHFRFLIFYLVCAIAG------------- 123

Query: 112 QIIGSATNNGKINLTALFQGEFNTQQLSMAQAVTLRSIYFGGMVGASGAIFGLLVAFGML 171
                          ALF G              +     G ++GASGA+ G++ A+ +L
Sbjct: 124 ---------------ALFHG-------------FVAPTSEGPLIGASGAVSGVVAAYFLL 155

Query: 172 YPNAE---LLIMFIPVPVKAKYIIPIYI---LVELSLGVAQFEGDSIAHYAHLGGALIGF 225
           +P      L++M IP+P+ A   + ++I    + L+LG+ Q    +++  AH+GG L G 
Sbjct: 156 HPRVRVWVLVLMRIPLPLPAFIPLALWIGQQFLMLALGLEQ----NVSWGAHVGGILAGA 211

Query: 226 ILV 228
           I+V
Sbjct: 212 IMV 214