Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 983 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  241 bits (616), Expect = 2e-67
 Identities = 282/1133 (24%), Positives = 467/1133 (41%), Gaps = 183/1133 (16%)

Query: 1    MKKIYLTSLSILLLCMATISAFAQKTVSGTVTDNQ-GLPLAGVSVFLKGTTKGTSTSTEG 59
            MKKI L   ++ L  MA  +    +TVSG VTD + G  L GV+V LKGT  GTST  +G
Sbjct: 1    MKKILLLVFTVGLF-MAQHALAQSRTVSGKVTDQEDGQALPGVAVVLKGTPTGTSTGVDG 59

Query: 60   KYTLSVPSN---STIVFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNT 116
             Y++ VP+N   +T++FK++G + +E+ VG    I+V L  DAK L EVVVTG   + N 
Sbjct: 60   TYSIDVPANHADATLIFKFVGMVEQEIVVGAKKVIDVALQTDAKQLAEVVVTGYTTQ-NK 118

Query: 117  RNLGYAMNNIKGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGS 176
            R +  ++  +  +++      +   ALQG  PG+++Q  +G P +     IRG  S+ G+
Sbjct: 119  REVSGSIATVNAEEVSQVPLASFDQALQGKAPGVLIQAQSGQPGAPAAVTIRGKGSIVGT 178

Query: 177  ENTPLIVVDGV-ILSDDAMSPARAGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRA 235
             N+PL +VDGV I++DD                 ++N  D  + +VLK  + T+LYGSR 
Sbjct: 179  -NSPLYIVDGVQIMADD---------------FSTLNPADFSTFNVLKDAAATSLYGSRG 222

Query: 236  INGVLLITTKKGFAQK---GLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKGANGM 292
             NGV++ITTK+G A K      + + + +  +N   + D  Q+                 
Sbjct: 223  ANGVIVITTKRGVAGKTRINYNVQYGYSKAPENRLEVMDTNQKL--------------DY 268

Query: 293  NQINSASYGFSFGPKLDGSTILDIDGRQISNSILNNPLSLYETGRYVNSNISMQGGNEKT 352
               N   YG++    L     ++ D   +           + TG+ VN  +S  GGN+ T
Sbjct: 269  ELANGNPYGWT-EEDLSKLRKVNTDWEDV----------FFRTGKTVNHTLSASGGNDHT 317

Query: 353  TFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGD-AVVIDATASYSNVRGFNPQRISGD 411
             +  S +     G      L R+T       R GD +  ++AT  YS       +  S  
Sbjct: 318  VYYLSGSVFDQTGTVENTGLQRYTGRANIDSRAGDFSFGLNATLGYSEFTN-TIENNSVV 376

Query: 412  NSLIYGLTWGYPTNFDLDYWKDNYIDPVNGGRSTVDPFTTNQLFFRLNKFSQIQNENNFR 471
             + +  + W  P     D  + NY + ++G  + +     NQ + R     Q++   N  
Sbjct: 377  TTPLNAIRWTNPYETPYDE-QGNYTEIMSGQPNALQELLENQ-YLR----QQLKGVGN-- 428

Query: 472  GTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYGSGIRNVIDSRYRAGL 531
              ++    F + L L+TS   + +  N+ +  +  DP    G   +G    +   Y    
Sbjct: 429  AYVSYAVPFWEGLTLKTSWGGD-FTANEVNNFI--DPSTATGRAQTGRSGSLTRTYAKAF 485

Query: 532  NLNHKVN---------DFDLFLQLGSEVVRSQSKGANYGTSG-GLKVPAQYRLSNSINTP 581
                  +         D  L + L +EVVR   KG N+G +G GL          +  T 
Sbjct: 486  RYTGTTSAAYTKTFGIDHRLGVALFNEVVR--YKGNNFGFTGYGLGGAFDNEAGVTPGTA 543

Query: 582  TVG-----EGTPNISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYP 636
              G      G+ +++ + + +A    G+K    LNL AR++ +S         N+     
Sbjct: 544  DNGYIPAVNGSGSVNALVSYFADVQYGFKERYFLNLGARRDGSSRFGSDRRYANFG---- 599

Query: 637  GADLAWIFTD----ALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSN 692
               L+WI TD    A    +V +  KL+ASY   G   +     T +  +    +AV + 
Sbjct: 600  SVGLSWIVTDEGFMAGLRDNVLNELKLKASYGSAGNQAL----ETDFASRELFARAVYNG 655

Query: 693  TANIEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSV 752
             + + Q       L NP L+  R  +   G EL   + RL +    Y   T +  +N  +
Sbjct: 656  VSGLLQ-----TQLANPMLQWERRTTLNAGFELATLQGRLRVTGEFYNALTSDLFLNRQL 710

Query: 753  PSESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTV 812
               SG  + + N G+++++G+E  L G  ++ + F+W A  + T N+N+I  L    + +
Sbjct: 711  SRTSGYSSLVTNVGELRNRGVEMSLEGDLLQLKDFTWSATISLTYNKNEITKLVGNDSEI 770

Query: 813  QLEGGDGIRTIAKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGG-AF 871
            +    +GI  I +VG   ++L        Y  R A  NP               TG   F
Sbjct: 771  E----NGI-YINRVGEPMNSL--------YLVRYAGVNPT--------------TGDPQF 803

Query: 872  YTRASNYAN--GLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFY 929
            YT+     +         +GS     +G       YK   LSA      G  V      Y
Sbjct: 804  YTKEGEVTSVYNPNDRVVVGSVEAPLFGGFGTSVNYKGFELSAFFSFVRGNKV------Y 857

Query: 930  GSQTGNLKNT--LFGRTVENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQA 987
             +   N++N   L+     +  T + + G+                              
Sbjct: 858  NNDRANIENPQYLYDNLATSMLTEWRKPGDI----------------------------- 888

Query: 988  IDKGLRIPTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGV 1047
                 +IP     +YN++         R      ++ +R++ +SY LPK+   ++ +  +
Sbjct: 889  ----TQIPRWDATWYNDAT-------TRMVESGDFLRLRNVNVSYALPKSLTGRMHVESI 937

Query: 1048 KVYASARNIGFLYNNAPDNLNVNDFTSTGAGGAFLGGGTPYVRTFGLGINGSF 1100
            KV+A  +N+      A        F    + G   G   P +RT   G+N  F
Sbjct: 938  KVFAQGQNLKTWTGFA-------GFDPEVSTGILSGAQYPALRTVTFGLNIGF 983