Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1160 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  375 bits (962), Expect = e-107
 Identities = 296/1072 (27%), Positives = 490/1072 (45%), Gaps = 132/1072 (12%)

Query: 25   KTVSGTVTDNQGLPLAGVSVFLKGTTKGTSTSTEGKYTLSVPSN-STIVFKYLGYLNKEV 83
            K VSG+V D +G PL G ++  KG++ GT T  +GK++L VP +  +I+  ++GY  KEV
Sbjct: 137  KKVSGSVLDEKGEPLPGATILAKGSSTGTVTDMDGKFSLEVPDDIQSILVSFIGYETKEV 196

Query: 84   SVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTINPIAAL 143
            S+     +++ L+    +L EV+VT LG  RN   +GYA   +  + +  A   N    L
Sbjct: 197  SIDGTAVLDIRLIPSESSLNEVIVTALGIRRNENEVGYAEQTVDSELLSTAMAPNWSNGL 256

Query: 144  QGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVILSDDAMSPARAGDQ- 202
            QG + G+ +  G  GP +S   Q+RGA+SL    N  LIVVDGV ++  A +     D  
Sbjct: 257  QGKIAGLNIISGGTGPINSQSIQLRGATSLAPGGNNALIVVDGVPMNQHATAFGDGVDAG 316

Query: 203  -------DFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQKGLGI 255
                   D+GN +  +N DDIES++VLKG +  ALYGSRA NG L+ITTK G   + LG+
Sbjct: 317  YGTEAPVDYGNAISELNQDDIESVTVLKGPAAAALYGSRAGNGALIITTKSGRKGQRLGV 376

Query: 256  SFSHDETFDNAYALPDMQQEYGSG-FTPRD-----FIKGANGMNQINSASYGFSFGPKLD 309
            S S    FD     P+ Q +YG+G +  R+     F    N  + I S +   ++G K D
Sbjct: 377  SVSSTAIFDVPTNWPNYQYQYGAGNYAVRNDEGEQFYSYGNSEDGI-STNVPQAWGAKFD 435

Query: 310  GSTILDIDG--------RQISNSILNNPLSLYETGRYVNSNISMQGGNEKTTFRFSYANN 361
            G      D         R +     NN    Y TG    ++++++GG++K   R +  + 
Sbjct: 436  GQYFYQYDPATQAQGSERTLWRPYENNMKDFYNTGTTFINSVALEGGDDKGAMRLNLTHA 495

Query: 362  FTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYS-----NVRGFNPQRISGDNSLIY 416
              K + P    ++++ +     ++ + + +    +Y+     N+ GF       + SL Y
Sbjct: 496  DNKYLVPNTGYDKNSISLNANYQVSERIKVSTVLNYNQRTSDNLPGFG----LSNGSLGY 551

Query: 417  GLTWGYPTNFDLDYWKDNYIDPVNGGRST--VDPFT---TNQLFFRLNKFSQIQNENNFR 471
             + +  P N D+D+++  +    NG  +   ++PF+   +N  F      +++++ N   
Sbjct: 552  FMMFLMP-NVDIDWYRPIW---QNGQENLQQLNPFSQWSSNPYFLSYVDLNKLKS-NQIV 606

Query: 472  GTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYGSGIRNVIDSRYRAGL 531
            G ++A    T  L +    SLN  +  +E            GYYG   +++ +    A  
Sbjct: 607  GNVSADIKLTDHLSVMGRLSLNSLSQLRESERGYSSKKHPRGYYGR--QDISNQEINADF 664

Query: 532  NLNHK---VNDFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEGTP 588
             L +K       D  ++ G   +   ++     +   L  P  Y LSN +N P V E   
Sbjct: 665  LLTYKNTISEIIDYEVRAGGNRMSMVNRNV-MSSVDALISPGVYNLSNGVNLPLV-ETRD 722

Query: 589  NISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTDAL 648
             +  + + Y   +  +K+ + +++  R +W+STL   N +    YFYP    +++ ++  
Sbjct: 723  ALKDINSLYGMATFSWKDNIIVDVTGRNDWSSTLPEENNS----YFYPSISSSFLVSNMF 778

Query: 649  KMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSNTANIEQYGFDSQTLGN 708
            ++P   S+ K R SY   G     Y++        S Y A +S  ++    G     L N
Sbjct: 779  QLPEKISFLKYRVSYAQVGSDANPYQT--------SKYYAQSSFPSSAIVPG----ALFN 826

Query: 709  PDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRLINSGDV 768
              LKP      E G   KMF+NRLG+DFT Y   TKNQI+ L     +G  +R+IN+G+V
Sbjct: 827  THLKPEITSGFETGFLFKMFENRLGVDFTYYASTTKNQILTLPSDIAAGYSSRVINAGEV 886

Query: 769  QDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTVQLEGGDGIRTIAKVGG 828
            +++G+E IL+ TPI  + F WD   N++ NRN+I++L   +    L        IA VGG
Sbjct: 887  RNRGVELILTATPIFNKDFKWDITGNWSMNRNEILTLTDNLERQTLARVWQGYMIATVGG 946

Query: 829  EYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGLESEST- 887
              S +     Y     RD  GN +                         Y+NG+ + ++ 
Sbjct: 947  TTSDI-----YGTKFVRDPAGNIV-------------------------YSNGVPTRTST 976

Query: 888  ---IGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTLFGRT 944
               IG+  P +   + N F YK+   S  +D + GG ++S TY   S  G   NT+ GR 
Sbjct: 977  QEYIGNAAPDWKYGLTNTFVYKNFRASLTVDGQMGGLIYSGTYNRASWAGTTTNTIPGR- 1035

Query: 945  VENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQAIDKGLRIPTITWRYYNN 1004
                         +E  +V DGV          N  G      ++   +       YY  
Sbjct: 1036 -------------EEGFIVGDGVVQ--------NEDGSYSSNTVEADPQ------AYYVQ 1068

Query: 1005 SNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNI 1056
                 +   E G F ++++ +R++T +Y+ P      + +  + +    RN+
Sbjct: 1069 R----HQTTEPGVFDATFLKIRELTFNYNFPNKLTQPLGIYNLSLGVYGRNL 1116