Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1057 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  257 bits (656), Expect = 4e-72
 Identities = 279/1168 (23%), Positives = 480/1168 (41%), Gaps = 183/1168 (15%)

Query: 2    KKIYLTSLSILLLCMATISAFAQKTVSGTVTDNQ-GLPLAGVSVFLKGTTKGTSTSTEGK 60
            K  + T L +LL+ ++      +K ++G V+DN  G  + GV++ + GT++GT T  +GK
Sbjct: 4    KNYFRTCLILLLVFLSQGLVAQEKNITGIVSDNSTGETIPGVNILIDGTSQGTVTDLDGK 63

Query: 61   YTLSVPSNSTIVFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLG 120
            ++++  +   ++F Y+GY+ K+V++   + +NV +  D+K L E+VV G GE+ +   L 
Sbjct: 64   FSITANTGDVLIFSYIGYVTKKVTIDHASNLNVGMETDSKQLEEIVVIGYGEQ-SRETLT 122

Query: 121  YAMNNIKGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENT- 179
             ++  +    +      N  +AL+G V G+ VQ  TG P ++P+  +RG +S+       
Sbjct: 123  SSVAKLDKKVLENIPFSNAASALKGTVSGVRVQTTTGQPGAAPRIIVRGGTSINNPNGAE 182

Query: 180  PLIVVDGVILSDDAMSPARAGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGV 239
            PL ++DGVI  +                +  IN DDIES+ VLK  + TA+YG+R  NGV
Sbjct: 183  PLYIIDGVIRDN----------------MNDINPDDIESLQVLKDAAATAIYGARGSNGV 226

Query: 240  LLITTKKGFAQKGLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKG----------- 288
            ++ITTK G   K   +++  +      +   DM       +  R+ +             
Sbjct: 227  VIITTKSGKVGK-TSVTYRFNIGASQMWNRYDMASARDYIYFNRNGVLATSEKHPEHLFR 285

Query: 289  ---ANGMNQINSASYGFSFGPK-LDGSTILDIDGRQISNSILNNPLS------------L 332
               ANG    N  S   +F P+ L       ++    S     NP              L
Sbjct: 286  LGLANGFGIGNDLSNATAFTPQYLTSENEYKLNEGWQSMPDPANPDETIIFAETDWQDVL 345

Query: 333  YETGRYVNSNISMQGGNEKTTFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVID 392
            + T    N  +++ GG+EK  +         +G++      R T     T+  GD  V D
Sbjct: 346  FRTAVSQNHYVNVSGGSEKARYDIGVGYLDNEGVAINTDFKRFT-----TRMNGDIQVND 400

Query: 393  ATASYS--NVRGFNPQRISGDNSLIYGLTWGYPTNFDLDYWKDNYIDPVNGGRSTVDPFT 450
                Y   N    +  ++  +N L +    G P    L Y++D  + P    RS  +P  
Sbjct: 401  KLGVYGRLNFTSSSNSQVYSENQL-FQRALGLPPTAKL-YYEDGTLAP-GQNRSMGNP-- 455

Query: 451  TNQLFFRLNKFSQIQNENNFRGTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGF 510
                 ++L++   +   +    +  A     K    E  ASL +  + +          F
Sbjct: 456  ----LYQLDRIDALNATHRMTLSGGANWEIFKDFTFEPMASLYYVQSTQN--------SF 503

Query: 511  KGGYYGSGIRNVIDSRYRAGLNLNHKVNDFDLFLQ----LGSEVVRSQSKGANY------ 560
            +  YY +G   ++DSR  +  N  +    FD        LG    + +  G+ Y      
Sbjct: 504  QKSYY-NGPTQLVDSRNASASNSTYWQKQFDGVFSYQKVLGFHNFQFKLGGSYYDRQNYV 562

Query: 561  -GTSGGLKVPAQYRLSNSINTPTVGEGTPNISQVFASYAQGSIGYKNWLTLNLYARKEWN 619
               SG           N+   PT    + +   +   + + +  +     L+L AR +  
Sbjct: 563  ASASGRGAASDLIPTLNASAEPTAVSSSLSQQVIIGYFGRVNYDFDKKYLLSLTARYDGA 622

Query: 620  STLVYSNGTGNYNYFYPGADLAW-IFTDAL--KMPSVFSYGKLRASYVVTGG-GTVVYRS 675
            S L    G+ NY  F+PG    W +  +A    MP  +S  K+RASY V G  G +    
Sbjct: 623  SNL----GSNNYWGFFPGISAGWNLHREAFWANMPETWSSFKVRASYGVNGNIGNLSDFH 678

Query: 676  NTGYYLKGSNYQAVNSNTANIEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLD 735
              G Y  G+ Y          +Q    +  + N DL+  R+ + +IG++L +F +R+ + 
Sbjct: 679  AQGLYSVGNRYN---------DQAAIQNNRMANQDLQWERSGTFDIGLDLGLFNDRVSVI 729

Query: 736  FTAYRKNTKNQIINLSVPSESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNY 795
               Y + T N + NL +P  +G  + L N G ++++G+E  +    I+ Q F+W+   N 
Sbjct: 730  ADYYNRLTDNLLTNLELPQSTGFSSILTNLGSLRNEGVEMEIGAAIIQKQDFAWNVSANA 789

Query: 796  TRNRNKIISLAP---------GVTTV-QLEGGDGIRTIAKVGGEYSTLVAAYGYAKYQA- 844
            + N N ++ L           GV    Q+ G    +   + GG    L A      Y   
Sbjct: 790  SYNINTVVELPENDNENNRIGGVLVYDQMTGQYTWKGGLQEGGHVGDLFAYQQLGVYATD 849

Query: 845  RDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGLESESTI--GSTLPKFYGSIRNV 902
            ++A   P D    G      +  GG       +  + ++S   +  G+  PK+ G   N 
Sbjct: 850  QEAAEGPYDELVPG---TDKSKFGGDVNWADLDANDSIDSRDRVYAGNIYPKWTGGFTNT 906

Query: 903  FTYKSLSLSALIDAKFGGYVF--SDTYFYGSQTGNLKNTLFGRTVENGGTAYTEAGNQEI 960
            F+YK LSL+   D   G  ++  S   F G   G++        +E   T++ + G++  
Sbjct: 907  FSYKGLSLTVRTDFALGHTIYHESRARFNGQYQGDI------GILEETTTSWQQQGDE-- 958

Query: 961  GVVLDGVFADGTIINGVNVGGMSHQQAIDKGLRIPTITWRYYNNSNGWGNGIRERGAF-- 1018
                                               T   RYY     W + + +  +F  
Sbjct: 959  -----------------------------------TDISRYY-----WADQLAQNNSFRG 978

Query: 1019 ------KSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNIGFLYNNAPDNLNVNDF 1072
                  K  ++A+R++TLSY LPK +V+ +K+  V+ Y +  N+   Y      LN  + 
Sbjct: 979  NTLYYEKGDYLAIRELTLSYTLPKKWVNALKIGNVRTYMTGSNL--YYFTQYTGLNPEE- 1035

Query: 1073 TSTGAGGAFLGGGTPYVRTFGLGINGSF 1100
                  G    G  P  R+F LG+N +F
Sbjct: 1036 ------GGTDSGRYPIPRSFLLGVNVNF 1057