Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1033 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  372 bits (954), Expect = e-106
 Identities = 321/1138 (28%), Positives = 515/1138 (45%), Gaps = 146/1138 (12%)

Query: 1    MKKIYLTSLSILLL---------CMATISAFAQKTVSGTVTD-NQGLPLAGVSVFLKGTT 50
            M+KI LT + ++++           +  S+   KT++GTVTD + G P+ GV+VF KGTT
Sbjct: 1    MRKILLTMMIMVMMGGHYMSMAQTPSPSSSSPAKTITGTVTDADSGEPIPGVNVFRKGTT 60

Query: 51   KGTSTSTEGKYTLS-VPSNSTIVFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTG 109
             GTST  +G YTL+ VP N+T+VF ++GY ++E+ V   +TI+V L  D + LGEVVVT 
Sbjct: 61   TGTSTDLDGNYTLNNVPENATLVFSFIGYTSQEMPVQGKSTIDVALSQDTEELGEVVVTA 120

Query: 110  LGEERNTRNLGYAMNNIKGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRG 169
            LG  +    LGY++  +  + +  A   N   +L G V G++V+  + GP  + K  +RG
Sbjct: 121  LGISKEKEKLGYSVTEVGSEALDQARETNVANSLAGRVAGLVVKGTSSGPGGTSKITLRG 180

Query: 170  ASSLYGSENTPLIVVDGVILSDDAMSPA-RAGDQDFGNVLKSINSDDIESISVLKGGSVT 228
              S+ G+  +PL V++G+ + +     A + G  D G+ + +++ DDIES++VLKG + +
Sbjct: 181  LPSISGT-GSPLYVINGIPMDNTQRGSAGQWGGSDNGDGIGNLSPDDIESMTVLKGQAAS 239

Query: 229  ALYGSRAINGVLLITTKKGFAQKGLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKG 288
            ALYGSRA NGV+LITTK G       + ++ +   + A    D Q  YG G        G
Sbjct: 240  ALYGSRASNGVILITTKAGKKGGDWSLDYTMNFMAEQAVDFTDFQNVYGQG------TGG 293

Query: 289  ANGMNQINSASYG-FSFGPKLDGSTILDIDGRQISNSILN-NPLSLYETGRYVNSNISMQ 346
                   ++ + G  ++G  +DGS ++  DG     +  + N +  Y TG    + +S+ 
Sbjct: 294  LKPTTAADAQTTGRLAWGAMMDGSQVIGFDGNNYPYAPASENYIDFYRTGTNFTNTVSVS 353

Query: 347  GG-NEKTTFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFNP 405
             G  +  +FR S++N     I P + ++R T N    Q + D + + A  +Y N    N 
Sbjct: 354  KGLGDDGSFRLSFSNLDANSIVPNSGMDRKTINLNVDQNITDKLNVTAMVNYVNQLSTNI 413

Query: 406  QRIS----GDNSLIYGLTWGYPTNFDLDYWKDNYIDPVNGGRSTV--DPFTTNQLFFRLN 459
              +S      N+ ++        N D + +   Y +P  G  +    D + TN  F    
Sbjct: 414  PYLSDGPRNPNNFLF-----LAPNIDHNIFAPGY-NPETGAETVFSDDIYVTNPYFITEK 467

Query: 460  KFSQIQNENNFRGTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYGSGI 519
              + ++  N     ++AK +FT     +  A +   N    D+    +P   G  Y + +
Sbjct: 468  GINDLER-NRTISALSAKYSFTP----DIYAMVRVGNDVSNDKVNTVEP--YGLAYTADL 520

Query: 520  RNVIDSR---YRAGLNLNH---KVNDF--DLFLQLGSEVVRSQSKGANYGTSGGLKVPAQ 571
            +  +++R    R+ LN++     V D   D+ +   + V   ++K  + G SG   V   
Sbjct: 521  QGALNNRGQSTRSELNIDGIFGAVVDLTEDIEMDALAGVNMRKNKFESIGLSGSRFVLPY 580

Query: 572  YRLSNSINTPTVGEGTPNIS----QVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNG 627
              L +  NT         +S    +V ++Y     GYK++LTL    R +  STL     
Sbjct: 581  --LYSPYNTEIFNRNNNTLSYQEREVHSAYYSLGFGYKDFLTLTTTGRYDVYSTL----N 634

Query: 628  TGNYNYFYPGADLAWIFTDALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQ 687
              N + F P   LA++F   L + ++  +GK RASY VT G          YY   + + 
Sbjct: 635  PENNSIFSPSVTLAFVFDRLLNIDAM-DFGKFRASYAVTSGEPTQPYQTQFYYSSANAFN 693

Query: 688  AVNSNTANIEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQI 747
             V + +A +        +L N DLKP      E+G++L  FKNRL  D   + K T ++I
Sbjct: 694  GVPAGSAPL--------SLPNKDLKPFTTDEVELGLDLSFFKNRLSFDIAYFTKTTHDEI 745

Query: 748  INLSVPSESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAP 807
            +N +    SG  + ++ +G V ++G+E ++SG P++T  FSW+   N T  +N+++S  P
Sbjct: 746  MNATYSITSGFNSGVVATGSVSNKGLEVLVSGVPVQTTKFSWNTSVNMTSVKNEVLSTGP 805

Query: 808  G---VTTVQLEGGDGIRTIAKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISP 864
                +T  Q     G    A V GE    + AY YA  +             +G  ++  
Sbjct: 806  DNNPITLGQNRATLGNAVTAFVVGESGPQIRAYDYAYNE-------------DGSIMVDD 852

Query: 865  AGTGGAFYTRASNYANGLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFS 924
            +G          N+          GS LP FYG   N F Y  +S S LID  FG  V S
Sbjct: 853  SGL--PVRGELKNW----------GSVLPTFYGGWNNTFNYNGISFSFLIDYSFGNKVLS 900

Query: 925  DTYFYGSQTGNLKNTLFGRTVENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSH 984
             T +Y +  G  KNTL GR  E G +   E  + E                         
Sbjct: 901  ATEYYSTWRGLHKNTLVGR--EGGISTNGETASAE------------------------- 933

Query: 985  QQAIDKGLRIPTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLP-KAFVSKIK 1043
                            YY +       +         ++ +R +TL Y LP K F +   
Sbjct: 934  ---------------DYYKS---LAQNVTSTSVVDGDFIKLRQLTLGYALPAKWFANTPV 975

Query: 1044 MNGVKVYASARNIGFLYNNAPDNLNVNDFTSTGAGGAFLG-GGTPYVRTFGLGINGSF 1100
            + G+ V   ARN+  L  +A    N++   S G+   + G  GT    T   G N  F
Sbjct: 976  VKGLNVSLVARNLAILMRHAE---NIDPEASFGSNINYTGIEGTSLPSTRSYGFNLKF 1030