Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1031 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  376 bits (965), Expect = e-108
 Identities = 320/1120 (28%), Positives = 521/1120 (46%), Gaps = 115/1120 (10%)

Query: 1    MKKIYLTSLSILLLCMATI-SAFAQK-TVSGTVTDNQ-GLPLAGVSVFLKGTTKGTSTST 57
            MK+ + T LSIL+     + SA+AQ+ T++GTVT  + G PL GVSV L+GT  GT T  
Sbjct: 1    MKRTF-TKLSILVFVFLLVGSAYAQEVTITGTVTTAEDGEPLPGVSVLLQGTNSGTVTDL 59

Query: 58   EGKYTLSVPSNS-TIVFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNT 116
            +G Y++ V     T+VF YLGY+ + +++ +  TI+V + +D   +GE VVT    +++ 
Sbjct: 60   DGNYSIDVADREGTLVFSYLGYVTQTLAIQNRTTIDVVMEEDVSEMGEFVVTAFDIDQSE 119

Query: 117  RNLGYAMNNIKGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLY-G 175
            ++LGYA   ++ D+I      N + ALQG V G+ +    G P  S +  IRG +SL   
Sbjct: 120  KSLGYAAQVVESDEITKTKQPNLVNALQGQVAGVQITNSGGAPGQSARIVIRGINSLDPN 179

Query: 176  SENTPLIVVDGVILSDDAMSPARAGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRA 235
            + N PL VVDGV +++  +       +   N    IN +DIES+SVLKG + TALYG RA
Sbjct: 180  ANNQPLFVVDGVPINNSTIESGNT-PRGMSNRAADINPNDIESMSVLKGAAATALYGVRA 238

Query: 236  INGVLLITTKKGFAQKGLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKGANGMNQI 295
             NG ++I TK+G A +   I+ +     D    LP++Q ++G GF               
Sbjct: 239  ANGAVIIRTKRGQAGQ-TRININSSIGMDKLVKLPNLQDQFGQGF--------------- 282

Query: 296  NSASYG-FSFGPKLDGSTILDIDGRQISNSILNNPLSLYETGRYVNSNISMQGGNEKTTF 354
             S  Y   SF P   G+ I ++      +   +N    ++TG  +++NIS  GG+E  TF
Sbjct: 283  -SGEYDPSSFWPAW-GAPIAEVAETVPGHKYQDNWNRAFDTGLNIDNNISFSGGSENATF 340

Query: 355  RFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFNPQRISGDNSL 414
              S+     +GI P++  +R T    G+ +  +      + ++SN  G    R+  D  +
Sbjct: 341  YGSFGRLDQQGIIPFSDWSRTTAKLSGSVKASEKFDFSGSMNFSNSGG---NRVPHDRFM 397

Query: 415  IYGLTWGYPTNFDLDYWKDNYIDPVNGGRSTVDPFTTNQLFFRLNKFSQIQNENNFRGTI 474
               + W    +        +YI+P      T+  +      +     +   N N   G I
Sbjct: 398  ERMMYWAETQDVR------DYINP----DGTMKTYGNTNPIYDARFATYEDNVNRIIGNI 447

Query: 475  NAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYGSGIRNVIDSRYRA-GLNL 533
            N     T WL L      +  + ++ +   G   G  G    S    + ++R  A  L  
Sbjct: 448  NLNYRPTDWLTLSYRLGTDVSSDSRTEITPGPK-GIDGEVALSSTGFIEETRINARDLTS 506

Query: 534  NHKVN-------DFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEG 586
            N  +        D++  L+LG+++   +       T     +P  Y L+N+         
Sbjct: 507  NFYITLQKQFSGDWNTTLRLGNDIFERRYDRV-VSTGSDFVIPEFYNLNNTAQI--FASQ 563

Query: 587  TPNISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTD 646
               I ++   Y   ++ Y+N+L +NL  R + +STL   N +    +FYP  +L+++F++
Sbjct: 564  DSQIKRLVGFYGDLTVDYRNFLFINLTGRNDISSTLPKDNNS----FFYPSVNLSYVFSE 619

Query: 647  ALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSNTANIEQYGFD-SQT 705
             + MPS F++GK+RAS+   G        +T  ++ G+ + + +    N  Q GF  + T
Sbjct: 620  NMDMPSWFTFGKIRASWAQVG-------KDTQPHILGATFVSPSVFPLN-GQVGFSRNST 671

Query: 706  LGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRLINS 765
             G+P LKP    S E G +L     RL LD T ++ N+K+ II + +   +G  + + N+
Sbjct: 672  FGDPGLKPELTTSIEFGTQLSFLDGRLDLDVTYFKSNSKDMIIPVPISDATGFSSYITNA 731

Query: 766  GDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTV----QLEGGDGIR 821
            G++Q+ GIE ++    I+T  F W    N T+N+N+++ +  G+  +    Q   G    
Sbjct: 732  GEIQNSGIELVVGADIIETSDFKWTVTGNMTKNKNEVVGIREGIDEIIVGSQFGYGGSTV 791

Query: 822  TIAKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANG 881
            T+  + G+      AYG     +    G   +NP     +    G  G F  R     NG
Sbjct: 792  TMKLIEGD------AYGNMYGTSYQRYGADPENPMAQSSLPRVIGADG-FPVR-----NG 839

Query: 882  LESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTLF 941
              S+  +G+ +PK++G ++N F+YK+  LS LID +      +D   Y +Q  N  +   
Sbjct: 840  --SQLILGNAVPKWFGGLKNEFSYKNFDLSFLIDFR------ADLKQY-NQFDNFLSAF- 889

Query: 942  GRTVENGGTAYTEAGNQEIGVVLDGVFADG-TIINGVNVGGMSHQQAIDKGLRIPTITWR 1000
                  G   YT   N+ I  V DGV ADG T    V +G        D G         
Sbjct: 890  ------GKNDYTAIRNESI--VFDGVLADGSTNTQEVWLGQGVGPDGRDYGA-------G 934

Query: 1001 YYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNIGFLY 1060
            Y+ N+     GI E     +S++ +R+ITL YD     +       ++   +A NI  + 
Sbjct: 935  YWRNTY---RGISENFVQDASFIKLRNITLGYDFNTELLENTPFRSIRASVAANNI--IL 989

Query: 1061 NNAPDNLNVNDFTSTGAGG---AFLGGGTPYVRTFGLGIN 1097
                D  +   F S GAGG    F G G P V++F   +N
Sbjct: 990  FTPWDGFDPESF-SAGAGGNAVGFTGLGYPGVQSFFFTLN 1028