Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1207 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  363 bits (932), Expect = e-104
 Identities = 328/1146 (28%), Positives = 511/1146 (44%), Gaps = 131/1146 (11%)

Query: 27   VSGTVTDNQGLPLAGVSVFLKGTTKGTSTSTEGKYTLSVPSNSTI-VFKYLGYLNKEVSV 85
            + G V D +G PLAG +V +KG T GT T  +GK++L VP + T+ V  Y+G+ +KE++V
Sbjct: 121  IDGVVFDEEGNPLAGATVKIKGATTGTITDLDGKFSLEVPGSETVLVISYVGFHSKEMAV 180

Query: 86   GDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTINPIAALQG 145
            G+   + +TL    + L   VVT LG  R  R+LGYA++ + G         N + +L G
Sbjct: 181  GNQTNLRITLQGAYQNLEGAVVTALGIRREERSLGYAVSEVSGKDFERGGQDNMLKSLAG 240

Query: 146  LVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVILSDDAMSPARAGDQ--- 202
             VPG+ +   TGGP SS    IRG +SL G +N PL VVDGV + +   + ++ G+    
Sbjct: 241  RVPGVSIN-STGGPGSSVSMIIRGITSLSG-DNQPLFVVDGVPVINSLNNISQIGNDNKV 298

Query: 203  DFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQKGLGISFSHDET 262
            D+GN +  IN +DIES+SVLKG S  ALYGSRA NGV+LITTK G     + +S S +  
Sbjct: 299  DYGNAMSDINPEDIESVSVLKGPSAAALYGSRAGNGVVLITTKSGKNVDKVTVSVSSNTL 358

Query: 263  FDNAYALPDMQQEYGSGFTP--RDFIKGANGMNQINSASYGFSFGPKLD-------GSTI 313
             +  Y    M   + +G  P   D      G+  I   S     GP+LD        ++ 
Sbjct: 359  VEVPYKYLPMHSRFATGVRPYTPDNNPYPGGVLTIEEGS-SAGAGPELDRGYEAIQWNSP 417

Query: 314  LDIDGRQISNSILNNP---LSLYETGRYVNSNISMQGGNEKTTFRFSYANNFTKGISPYN 370
             D +G  I   +++NP    +    G    + +S+    EK  +R  Y N    GI P +
Sbjct: 418  RDENGNLIPLPLVSNPDNVANFVRNGVTTTNGVSVSNNTEKMNYRIGYTNLNNWGIVPNS 477

Query: 371  KLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFN-PQRISGDNSLIYGLTWGY--PTNFD 427
              NR+  +      + D + + ++ + S     N P    G N     L W Y    + D
Sbjct: 478  DFNRNNLSINSDLAITDKLRLSSSVNISRTGSDNRPAGNRGANP----LEWAYKLSPHID 533

Query: 428  LDYWKDNYIDPVNGGRSTVDPF-TTNQLFFRLNKFSQIQNENNFRGTINAKTNFTKWLQL 486
            ++  KD ++    G +         N  +F   + +   + N   G I      T    L
Sbjct: 534  INDLKDYWMPGQEGIQQRSQAIGDYNNPYFLAYEVNNSFDRNRVFGNIGLNYQITDEFSL 593

Query: 487  ETSASLNWYNTNKEDR---ELGQDPGFKGGYYGSGIRNVIDSRYRAGLNL----NHKVND 539
            +    L+ Y+  +E +      +DP   GGY   GI N+   RY   + +      ++ D
Sbjct: 594  QGKYMLDMYSERRESKIPMSYTEDP--NGGY---GIVNL--DRYERNIEVMATYQKELTD 646

Query: 540  FDLFLQLGSEVVRSQS---KGANYGTSGGLKVPAQYRLSNSINTPTVGEGTPNISQVFAS 596
            F +    G  +  ++    + A      GL VP  Y LSN+++   V   + +   V++ 
Sbjct: 647  FSMTYSAGGNLRYNRGNTMQNATKSEGSGLIVPGVYTLSNTLSDNLVYSSSISEKAVYSV 706

Query: 597  YAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTDALKMPSVFSY 656
            Y   ++GYK+ L L+L AR +W+STL       N +YFYP A L+ I +D L M +    
Sbjct: 707  YGLANLGYKDLLYLDLTARNDWSSTL----PAANRSYFYPSASLSAIISDMLPMGNQVDM 762

Query: 657  GKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSNTANIEQYGFDSQT-----LGNPDL 711
             KLRA +   G  T  Y           N     SNT   E++   ++      L  PDL
Sbjct: 763  IKLRAGWAQVGNDTGPY-----------NLLPTLSNT---EEWAGQTRLSVPDGLKTPDL 808

Query: 712  KPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRLINSGDVQDQ 771
            KP  A S E G+E   F+NRL  D T +  + KNQI+ +++P  SG  ++ +N+G V  +
Sbjct: 809  KPEIATSYEFGLEAAAFRNRLRFDITYFNTDNKNQILPVTLPPSSGFTSKYVNAGLVNSK 868

Query: 772  GIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTVQLEGGDGIRTIAKVGGEYS 831
            G E +L  TPI  + F  D  FN ++ R+ I  L   V    L         + VG E  
Sbjct: 869  GWEMVLGLTPIDNE-FVLDLNFNVSKYRSTIEELTDEVEVFYLWSDSRGGAWSYVGDEIG 927

Query: 832  TLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGLESESTIGST 891
            ++        Y  +       ++P  G  V+   G+      +A N AN   +++ +G+ 
Sbjct: 928  SI--------YDRKLVTVEDPESPYYGYPVLDEDGS-----WQAINQAN---AKNKVGNF 971

Query: 892  LPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLK-----------NTL 940
             P F   ++   +YK+ SLS   D + GG   S T+ Y     +LK           N L
Sbjct: 972  NPDFIAGMQASLSYKNWSLSLTFDWRKGGDFVSQTFRYSE--SDLKTQRFLDEIISPNGL 1029

Query: 941  FGRTVEN------------------GGTAYTEAGNQEIGVVL-DGVFADGTIINGVNVGG 981
             GR + +                  G TA +     E  V L DGVF  G I    + G 
Sbjct: 1030 SGRALRDWLVANKDTHITDGINIVGGPTAESGGFPFEYAVTLNDGVFNPGVIPVYNDAGE 1089

Query: 982  MSHQQAI--DKGLRIPTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFV 1039
            ++  Q    ++G +I       Y ++  W     +   F +S++ +RD TL+Y +P    
Sbjct: 1090 ITGYQENLGEEGTKIIP-----YADNYPW--DFFKPAMFDASYIKLRDATLNYSIPTETA 1142

Query: 1040 SKIKMNGVKVYASARNIGFLYNNAPDNLNVNDFTSTGAGGAFLGG-----GTPYVRTFGL 1094
             K+ M  + +     N+  L+  A   ++  +     + G F  G       P+V   G 
Sbjct: 1143 KKLNMQSINIGLYTSNL-ILWTKAKIGIDPENAFQPESDGTFKQGIERYNVNPWVIPIGF 1201

Query: 1095 GINGSF 1100
             +N  F
Sbjct: 1202 RLNAKF 1207