Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1150 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  430 bits (1105), Expect = e-124
 Identities = 324/1099 (29%), Positives = 522/1099 (47%), Gaps = 109/1099 (9%)

Query: 27   VSGTVTDNQGLPLAGVSVFLKGTTKGTSTSTEGKYTLSV--PSNSTIVFKYLGYLNKEVS 84
            ++G V D +GLP+ G SV +KGT  G+ T  +GK+++ V  P  + +V  ++G+ +KEV+
Sbjct: 136  ITGVVVDEEGLPIPGASVLVKGTMVGSVTDLDGKFSIEVDSPDEAVLVVSFIGFESKEVT 195

Query: 85   VGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTINPIAALQ 144
            +G  +++ + +     AL EVVVT  G ER+ + LGYA+ ++KG+++  A   N + +L 
Sbjct: 196  IGSESSLTIVMTSSTMALNEVVVTAFGLERDKKALGYAVQSVKGNELTEAQNPNVVNSLS 255

Query: 145  GLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVILSDDAMSPARAGDQDF 204
            G V G+ +   +  P S  +  IRG+SS+ G+ N PL+VVDGV L        +   + +
Sbjct: 256  GRVAGVQINSNSM-PGSGSQVIIRGSSSVAGN-NQPLVVVDGVPLD-------QTSSRTY 306

Query: 205  GNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQKGLGISFSHDETFD 264
            GN L  IN D+I+ ++VLKG +  ALYGSRA NGV+++TTK G   KG+G++ + + TFD
Sbjct: 307  GNGLSEINPDNIKEMNVLKGATAAALYGSRAANGVIMVTTKDGKGTKGIGVAINSNMTFD 366

Query: 265  NAYALPDMQQEYGSGFTPRD-FIKGANGMNQ---INSASYGFSFGPKLDGSTI-LDIDGR 319
            N    PD Q  YG G   R  ++ G NG ++     +A    S+G  +DG  + L     
Sbjct: 367  NPLVKPDFQNTYGGGAGYRTWYVDGRNGFDEQGIRGTAGVDESWGAPMDGRLVPLWFSAP 426

Query: 320  QI--SNSILNNPLSLYETGRYVNSNISMQGGNEKTTFRFSYANNFTKGISPYNKLNRHTF 377
            ++       +N    +ETG+ V++NI++ GGN+K  FR S      K I   N   R+ F
Sbjct: 427  ELVPLTPQPDNWEDFWETGKTVSNNIAVSGGNDKGNFRLSVGRLDQKSIMWNNDYYRNNF 486

Query: 378  NFRGTQRLGDAVVIDATASYSNVRGFNPQRISGDNSLIYGLTWGY-PTNF-DLDYWKDNY 435
                     D + +  +A Y    G + +R SG +  I    W +  T+F  L  W+D Y
Sbjct: 487  KLNTGYNFTDKLNVTISAEYIK-SGSDNRRYSGSSDFI----WSHRHTDFTKLFNWRDYY 541

Query: 436  IDPVNGGRSTVD--------PFTTNQLFFRLNKFSQIQNENNFRGTINAKTNFTKWLQLE 487
                   R   D         + TN  F +   ++    ++   G I     FT    L 
Sbjct: 542  GIQRETFRDGDDYPYANWQHEYFTNPYFLQ-EYYTNANEKDRMVGNIAVNYQFTDEFSLM 600

Query: 488  TSASLN-WYNTNKEDRELGQDPGF---KGGYYGSGIRNVIDSRYRAGLNLNHKVNDFDLF 543
                 + W +T      + +   F   KG Y  + +R+   +            N F L 
Sbjct: 601  VRTGTDFWTDTRMNVTGVERTKNFVTTKGSYTETVLRSQETNSDFIFTYDKEFSNTFSLK 660

Query: 544  LQLGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEGTPNISQVFASYAQGSIG 603
             Q+G  + R+     NY     L +   Y LSN   +P   E T    +V + +   ++G
Sbjct: 661  AQVGG-INRTNYYKRNYVNVTELTIDGLYNLSN-YASPVTPESTIRKQEVNSLFGSATLG 718

Query: 604  YKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTDALKMPS-VFSYGKLRAS 662
            + N+L L++  R +W+STL   N     ++FYP   L+ + TD   + S V S+ KLRAS
Sbjct: 719  FNNYLFLDVTGRNDWSSTLPVDNN----SFFYPSVALSAVVTDIFNVQSNVLSFAKLRAS 774

Query: 663  YVVTGGGTVVYRSNTGYYLKGSNYQAVNSNTANIEQYGFDSQTLGNPDLKPLRAFSKEIG 722
            +   G     Y  +  Y  +G  +       AN  +       + N +LKP     KE+G
Sbjct: 775  WAQVGSDASPYMLSQVYNSEGL-WAGTTPTYANASE-------IANVNLKPEITTGKELG 826

Query: 723  IELKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRLINSGDVQDQGIEFILSGTPI 782
            ++++  + R+GLDFT Y ++T NQI+ +++ S SG  ++++N+G++ ++G+E ++ GTPI
Sbjct: 827  LDMRFLEGRIGLDFTYYHQSTTNQILAVAISSSSGYASQVLNAGEITNKGVELMVYGTPI 886

Query: 783  KTQS-FSWDAFFNYTRNRNKIISLAPGVTTVQLEGGDGIRTIAKVGGEYSTLVAAYGYAK 841
            K+++  +WD  FN++RNRN ++ LA G+    L   + + + A+VG  Y TL     Y +
Sbjct: 887  KSETGLTWDMSFNFSRNRNLVVELAEGLENYTLASQNSLTSEARVGQPYGTL-----YGR 941

Query: 842  YQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGLESESTIGSTLPKFYGSIRN 901
               R   G  + +         P    G F                +G+  P + G   N
Sbjct: 942  RYLRSPEGEIVYSDG------LPQLEAGTF---------------ALGNIQPDWMGGFSN 980

Query: 902  VFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTLFGRTVENGGTAYTEAGNQEIG 961
             F++++ SL ALID + GG +F        +TG    T  GR               E G
Sbjct: 981  NFSFRNWSLGALIDIRMGGDLFDVGTGLARKTGQYAETAIGR---------------EEG 1025

Query: 962  VVLDGVFADGTIINGVNVGGMSHQQAIDKGLRIPTITWRYYNNSNGWGNGIRERGAFKSS 1021
            V+ +GV   GT    V V    +   +D G         ++N  N       E G F  S
Sbjct: 1026 VIGEGVMNVGTEETPVYV---QNDVIVDAG--------TFWNAQN--PRTYHEAGIFDGS 1072

Query: 1022 WVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNIGFLYNNAPDNLNVNDFTSTGAGGAF 1081
            +V +R++TL Y  PK F+    +  +K+ A  RN+  L+ N P      D     A G F
Sbjct: 1073 YVKLRELTLGYSFPKNFLGNNFIQSMKLSAVGRNLAILFKNHPHMDPQVDMKGGNAQG-F 1131

Query: 1082 LGGGTPYVRTFGLGINGSF 1100
              G  P  R+ G  +N +F
Sbjct: 1132 SYGEQPSTRSIGFNLNVTF 1150