Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1167 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  430 bits (1105), Expect = e-124
 Identities = 325/1089 (29%), Positives = 514/1089 (47%), Gaps = 136/1089 (12%)

Query: 24   QKTVSGTVTDNQGLPLAGVSVFLKGTTKGTSTSTEGKYTLSVPSNS-TIVFKYLGYLNKE 82
            ++TV+G VTD+ G PL GV++ ++GT+KG  T   GK+ L + S   T++  YLGY  ++
Sbjct: 120  RQTVTGKVTDSTGEPLPGVTLLIQGTSKGGVTGPNGKFRLEIESFPLTLIVSYLGYKTQQ 179

Query: 83   VSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTINPIAA 142
            V V +   + +TL ++  AL EVVVT LG +R  + LGYA   I   Q+  A   N   A
Sbjct: 180  VPVQEAAPLTITLEENVSALDEVVVTALGMKREEKKLGYAQQTIDARQLTDARPNNWSEA 239

Query: 143  LQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVIL---------SDDA 193
            L+G VPG+ +  G GGP  S +  +RG SSL    N  LIV+DGV +         S+  
Sbjct: 240  LRGKVPGLQIN-GLGGPVGSQQIILRGNSSLDPGNNGALIVIDGVPIQNEHPGSGPSNGY 298

Query: 194  MSPARAGDQ--DFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQK 251
            M  + + D   D+GN +  +N DDIES+SVLKG + +ALYG +A NG ++ITTK G  QK
Sbjct: 299  MGGSASNDTPVDYGNAISDLNPDDIESVSVLKGPAASALYGYQAANGAVIITTKSGKGQK 358

Query: 252  GLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKGAN-----------------GMNQ 294
            GLG++ S +  FDN    PD Q EYG G     ++K A                  G ++
Sbjct: 359  GLGVTISSNTKFDNIQRWPDWQYEYGQGSGKGGYLKPATDENGNPVPYNDRLYYTYGASE 418

Query: 295  INSASYGFS--FGPKLDGSTILDIDG--------RQISNSILNNPLSLYETGRYVNSNIS 344
              +++ G S  FGPK DG      D         RQ+     NN    ++TG    +N+S
Sbjct: 419  DGNSTAGSSSAFGPKFDGQYYYQYDPTLEGQSAERQLWRPYENNRTDFWQTGVTQTTNLS 478

Query: 345  MQGGNEKTTFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFN 404
            +QGG+EK + R S  ++    + P     + + +  G  ++ D + + +   Y N    N
Sbjct: 479  IQGGDEKGSMRGSITHSKNDWVMPNTGFEQLSLSVNGNYQVTDRIKLSSVVDYRNRTSDN 538

Query: 405  -PQRISGDNSLIYGLTWGYPTNFDLDY----WK--DNYIDPVNGGRSTVD-PFTTNQLFF 456
             P +   ++S+ Y + +  P N DL +    WK     +D +    S +D P+    ++ 
Sbjct: 539  LPGQGYNNHSIAYFMIFQNP-NVDLAWYEPIWKKGQEQVDMIRPYSSYIDNPYA--MVYE 595

Query: 457  RLNKFSQIQNENNFRGTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYG 516
              N   Q     NF+  I         L+     +LN Y+ N +         +  GYY 
Sbjct: 596  IQNSLDQYAITGNFKMDIELHPKVNLMLR----GALNMYDKNMDQERPYDINRYARGYYR 651

Query: 517  SGIRNVIDSRYRAGLNLNHK--VNDFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRL 574
                NV          L +    +D+++   +G   +  +    +   + GL++P +Y L
Sbjct: 652  K--TNVFKQEVNTDFLLTYTDTFDDWEVTANVGGNRMDYRYLRQD-SWAEGLEIPGEYNL 708

Query: 575  SNSINTPTVGEGTPNISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYF 634
             N     T        ++V + Y   ++G+++ + L+L  R +WNS L   N     +YF
Sbjct: 709  VNGSQLFT--SKFDGYNKVNSLYGMVTVGWQDKVFLDLTGRNDWNSILPKHN----QSYF 762

Query: 635  YPGADLAWIFTDALKMPSVFSYGKLRASYVVTGG-GTVVYRSNTGYYLKGSNYQAVNSNT 693
            +P A    I ++   MP+  S+ KLRAS    GG G    R +T  Y + S++       
Sbjct: 763  FPSASSGIILSEIFSMPNSISFAKLRASIAQVGGAGKYGNRYSTDKYYRRSDFPGS---- 818

Query: 694  ANIEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVP 753
                       +L N D KP    SKE+GI+ +MF++RL LD   Y+ N+KNQI N  +P
Sbjct: 819  ------ALAPTSLYNTDFKPEITTSKELGIDFRMFQSRLKLDVAVYQNNSKNQIFNAPLP 872

Query: 754  SESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTVQ 813
              SG ++  IN+G+V+++GIE +L+G+P+K ++F W+    + +N+  ++SL       +
Sbjct: 873  YSSGYRSVTINAGEVRNRGIEVMLNGSPVKNRNFKWNTTLTWAKNKGTVLSLHENAEGGR 932

Query: 814  LE--GGDGIRTIAKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAF 871
             E     G + +A  GG  + L     Y +   R   G  I + N      +P  T    
Sbjct: 933  FEMLSSSGAKLVAVEGGSPAAL-----YGRGYKRSPEGEIIFDENG-----APEMTDDII 982

Query: 872  YTRASNYANGLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGS 931
            Y               IG T PK+     N F YK+  ++A+IDAK+GG ++S T+   +
Sbjct: 983  Y---------------IGDTQPKWVAGFINTFQYKNFRINAVIDAKYGGTIYSHTHHKLT 1027

Query: 932  QTGNLKNTLFGRTV-ENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQAIDK 990
            Q G LK+TL GR   E  G    + G        DG +++ T                  
Sbjct: 1028 QQGKLKHTLVGREEGELVGKGVVDNG--------DGTYSENTT----------------- 1062

Query: 991  GLRIPTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVY 1050
                P     YYN      N   E  +F +S++ +R++TLSYD  + F++K  +N +++ 
Sbjct: 1063 ----PISIANYYNLMYPLAN--TEANSFDASFIKLREVTLSYDFSEKFLAKTPLNEMRLS 1116

Query: 1051 ASARNIGFL 1059
               RN+  L
Sbjct: 1117 VYGRNLAVL 1125