Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1058 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  395 bits (1015), Expect = e-114
 Identities = 318/1109 (28%), Positives = 504/1109 (45%), Gaps = 128/1109 (11%)

Query: 23   AQKTVSGTVTDNQ-GLPLAGVSVFLKGTTKGTSTSTEGKYTLSVPSNSTIVFKYLGYLNK 81
            A+ TV+GTVT ++ G P+ GVSV + GT+KGT T  +G Y+++     T+ + YLGY  +
Sbjct: 47   AEVTVTGTVTSSEDGAPIPGVSVTIVGTSKGTITDFDGNYSINTEEGQTLKYSYLGYTPQ 106

Query: 82   EVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTI-NPI 140
             ++VG   TI+V L  D + L EVVVT  G E++ ++LGYA+  + G+ I       + +
Sbjct: 107  TITVGSQTTIDVVLEQDTEELSEVVVTAFGIEKDKKSLGYAVQKVDGEDITTVKASPSAV 166

Query: 141  AALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVILSDDAMSPARAG 200
            + L+G V G+ +     GP S  +  IRG +SL  S N PL VVDG+ +  D  S +  G
Sbjct: 167  SNLKGRVAGVNITESGSGPGSGVRVIIRGNNSLTQS-NQPLYVVDGIPM--DNSSTSEGG 223

Query: 201  DQ----DFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQKGLGIS 256
            D     + G+ +  +N DDIES++VLKG +  ALYGSRA NGV++ITTKKG  +KG+G+ 
Sbjct: 224  DMYTSTNTGSGISDLNPDDIESMTVLKGPNAAALYGSRAANGVIMITTKKGKNRKGIGVD 283

Query: 257  FSHDETFDNAYALPDMQQEYGSGFTPRDFIKGANGMNQINSASYGFSFGPKLDGSTILDI 316
            FS    F N   LP+ Q EYG G       +G          + G S+G  LDGS  L  
Sbjct: 284  FSSSSVFSNPMLLPEFQNEYGQG------TQGRTPATMEELRTNGGSWGGPLDGSEQLYW 337

Query: 317  DGRQISNSIL-NNPLSLYETGRYVNSNISMQGGNEKTTFRFSYANNFTKGISPYNKLNRH 375
            DG     S   NN  + + TG    + +++ GGNEK + RFSY N + + +   + L R+
Sbjct: 338  DGTTKPYSAQPNNVENFFNTGGNFVNTVALTGGNEKVSARFSYTNTYNEAMVENSFLKRN 397

Query: 376  TFNFRGTQRLGDAVVIDATASYSNVRGFNPQRIS-GDNSLIYGLTWGYPTNFDLDYWKDN 434
             FN R T +L   + +DA A+Y++   F   R++ G   L+ G+ +  P N  +D ++D 
Sbjct: 398  NFNLRATAKLSSKLSLDAKATYTS--QFTRNRVNQGSEGLLAGV-YSIPRNAIMDDFRD- 453

Query: 435  YIDPVNGGRSTVDPFTTNQLFFRLNKFSQIQNENNFRGTINAKTNFTKWLQLETSASLNW 494
            Y D   G         +N  ++ LN        N F G    +  FT WL        +W
Sbjct: 454  YRDEETGLVRNYAESASNP-YWTLNYDKAEDTRNRFIGFAKVQYQFTDWLSAHARIGTDW 512

Query: 495  YNTNKEDRELGQDPGFKGGYYGSGIRNVIDSRYR---------AGLNLNHKVNDFDLFLQ 545
             +   E       PG    +Y  G     ++RY+            N+  K+    +   
Sbjct: 513  TDIRFES---ATQPGH--WFYPDGRVGFSNNRYQETNADFLFMIDKNITEKLR---VTAN 564

Query: 546  LGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEGTPNISQVFASYAQGSIGYK 605
            +G   ++  S+G +      L++P +  +  S +      G P      + YA  S  Y 
Sbjct: 565  IGGNHLQQLSQGMSL-NGQNLRIPTKTTI-GSADQVNYSAGVPTERVTNSLYASASFDYA 622

Query: 606  NWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTDALKM-PSVFSYGKLRASYV 664
              + L++  R +W STL     + +++YFYP  +LA + ++ +    ++  Y KLR S+ 
Sbjct: 623  GIVFLDVTGRNDWTSTL----PSNSWSYFYPSVNLALMVSEFIDPDQTLMDYLKLRGSWA 678

Query: 665  VTGGGTVVYRSNTGYYLKGSNYQAVNSNTANIEQYGFDSQTLGNPDLKPLRAFSKEIGIE 724
              G     +R    Y LK  N   +   T  I    +D       +L P    + EIG++
Sbjct: 679  SVGKDASAWRLQNSYNLKNKNNSYLGITTLTIPSVWYDQ------NLSPEFTKTYEIGLD 732

Query: 725  LKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRL------INSGDVQDQGIEFILS 778
                +NRL  DF AY   +   +I++ V +++   N L       N G++ ++G+E +L 
Sbjct: 733  GSFLRNRLYFDF-AYYDISSTDLIDI-VETDNLAVNPLGRAEVHTNVGEITNKGVEVMLG 790

Query: 779  GTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTVQ--LEGGDGIRTIAKVGGEYSTLVAA 836
            GTPIK + F+W+   N++ NRN++    P     Q  +       T A VG         
Sbjct: 791  GTPIKNERFTWNTNVNFSHNRNELKEFLPDAFNRQWNVNNSGSAETRATVGA-------- 842

Query: 837  YGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGLESESTIGSTLPKFY 896
             GY +  A D     + +P  G+ +++  G   A   R             +G   P + 
Sbjct: 843  -GYGEIWATDI----MTDPETGEWILTANGMPQATAQRVK-----------VGDFQPDYL 886

Query: 897  GSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTLFGRTVENGGTAYTEAG 956
                N F+YK  +L  LID +FGG +++ T       G  K TL  R             
Sbjct: 887  LGFNNSFSYKDFTLKFLIDGRFGGEMYAATQAAMDGAGISKKTLEYR------------- 933

Query: 957  NQEIGVVLDGVF--ADGTIINGVNVGGMSHQQAIDKGLRIPTITWRYYNNSNGWG--NGI 1012
              E G+++DG+    DGT  +                    +IT + Y     WG  +GI
Sbjct: 934  --EEGIIVDGIIENEDGTFSDNSQ-----------------SITAQQY-----WGAMSGI 969

Query: 1013 RERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNIGFLYNNAPDNLNVNDF 1072
                    + V +R+++L+Y +P +F+    +    +    RN+ F Y       +    
Sbjct: 970  GSNYIMDQTNVRLRELSLTYRIPTSFLGNSVVRSASISFIGRNLFFFYKAFDGGFDPEST 1029

Query: 1073 TST-GAGGAFLGGGTPYVRTFGLGINGSF 1100
              T  AG  +L    P  R+ G  +N  F
Sbjct: 1030 LGTSNAGQGYLYYAMPTARSLGFNLNVKF 1058