Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1062 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  467 bits (1202), Expect = e-135
 Identities = 337/1123 (30%), Positives = 538/1123 (47%), Gaps = 106/1123 (9%)

Query: 9    LSILLLCMATISAFAQKTVSGTVTDNQ-GLPLAGVSVFLKGTTKGTSTSTEGKYTLSVPS 67
            L  LLL  +  S     TV GTVT  + G P+ GVSV +KGT+KG  T  EG+Y+L VPS
Sbjct: 7    LFALLLVFSQFSFAQNSTVKGTVTSAENGEPVPGVSVLVKGTSKGAVTDLEGQYSLEVPS 66

Query: 68   NSTI-VFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNI 126
               + +F ++G   +EVS+     I+V++  D K+L EVVVT L   R+  +LGYA+ ++
Sbjct: 67   EGEVLIFSFIGMATEEVSIKGRTVIDVSMSSDVKSLNEVVVTALNVSRDESSLGYAIQSV 126

Query: 127  KGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQS-SPKFQIRGASSLYGSENTPLIVVD 185
             GD++ +    N + +L G V G+ V   +G     S   ++RG +SL G   +PL VVD
Sbjct: 127  DGDELSSVREANVVGSLAGKVAGVQVIGSSGAALGGSQNIRLRGINSLGGG--SPLFVVD 184

Query: 186  GVILSDDAMSPARA-GDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITT 244
            G  +S+ + SP      +D+GN+   IN DDIESISVLKG S  ALYG+RA NGV++ITT
Sbjct: 185  GTPISNRSFSPDNDYSGRDYGNLAADINPDDIESISVLKGPSAAALYGNRAANGVIIITT 244

Query: 245  KKGFAQKGLGISFSHDETFDNAYALPDMQQEYGSGFTPR----DFIK-------GANGMN 293
            KKG ++KG+G+  +H  TF+  Y LPD Q EY  G++      D+          A    
Sbjct: 245  KKGTSRKGIGVEINHSTTFEKVYILPDYQNEYAGGYSQELATFDYNPETHPESWAAFDGQ 304

Query: 294  QINSASYGFSFGPKLDGSTILDIDGRQISNSI---------LNNPLSLYETGRYVNSNIS 344
            Q+ + S   S+GP+++G  +   D      S           NN    +ETG  +N+ ++
Sbjct: 305  QVMNYSADESWGPRMEGQMVRHWDSWYEGESFGELRPLLPNENNVRDFFETGVTMNTGVA 364

Query: 345  MQGGNEKTTFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFN 404
            + GG+E+T FR S  +   KG+ P ++L ++  +F G+ +L D +      ++++ +G  
Sbjct: 365  LSGGDEETLFRLSLNHIDQKGVIPGSELLKNNVSFNGSTKLTDKLKASLNFNFTSTQGQG 424

Query: 405  --PQRISGDNSLIYGLTWGYPTNFDLDYWKDNYIDPVNGGR-------STVDPFTTNQLF 455
                  +G N +     W +    D+D   +NY +P    R       S   P   +  +
Sbjct: 425  RPASGYTGRNPVNSFNQW-FQRQLDMDRL-ENYKNPDGTYRTWNIRSPSNTRPLYWDNPY 482

Query: 456  FRLNKFSQIQNENNFRGTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYY 515
            + + + +     +   G      +FT+ L +   A  +++N   E+R           Y 
Sbjct: 483  YEVYENAPRDKRDRVYGNFGLTYDFTEELSVSAFARTDFFNQKIEERVASGGLDLDEYYI 542

Query: 516  GSGIRNVIDSRYRAGLNLNHKVNDFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRLS 575
               I    +  Y      +       L    G  + R+        T GGL VP  Y + 
Sbjct: 543  SQRIGR--EDNYEILAQYDKNFGGVSLVANAGGNIRRNFYDTMGERTQGGLSVPDFYNID 600

Query: 576  NSINTPTVGEGTPNISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFY 635
             SI+ P V         V + Y   S+GY + + L+L AR +W+S L  +N +    YFY
Sbjct: 601  ASIDRPDVSNYYSE-KTVRSVYGSVSLGYMSTIFLDLTARNDWSSALPKANNS----YFY 655

Query: 636  PGADLAWIFTDALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSNTAN 695
            P    +++FT+ +   +  ++GKLR SY   G     Y     Y + G+ Y ++ + T  
Sbjct: 656  PSISTSFVFTELMGNTNFLNFGKLRLSYAQVGSDVSAYDIAQVYDV-GTPYGSLPALTV- 713

Query: 696  IEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVPSE 755
                     T  NP+L+P  + S E G++L+  + RLGLD T YR + K+QIINL+VP  
Sbjct: 714  -------PNTYPNPNLRPALSSSYEAGVDLRFLQRRLGLDVTYYRNDNKDQIINLTVPGS 766

Query: 756  SGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAPGVTTVQLE 815
            SG+    +N+G+++ +G+E +LS TPI  Q F+WD   N+ RN N+++ L       QL+
Sbjct: 767  SGITQAKVNAGNIRSEGLEVMLSATPITNQDFNWDMTLNFARNTNQVVELYQDQGNRQLQ 826

Query: 816  GGD-GIRTIAKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTR 874
                G+   AKVG  + TL+       Y   +  G P+ NP+               Y  
Sbjct: 827  SAYWGMTLNAKVGEPWGTLIGT----GYTYDEETGLPMINPDGS-------------YVE 869

Query: 875  ASNYANGLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTG 934
              N          +G+ LP F G  RN  TYK+  L+A +D + GG  +S T  +   +G
Sbjct: 870  NQN--------QDLGTVLPDFTGGFRNTLTYKNFDLTAFLDFQKGGQFYSVTKMFLPYSG 921

Query: 935  NLKNTLFGRTVENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQAIDKGLRI 994
                T     + + G    +  +Q  G+ + GV  +G  +  V V    H     KGL  
Sbjct: 922  LAAET---AGLNDLGNPKRDPVDQGGGIPVTGV-VEGEGVQTVYVDPSEHY----KGL-- 971

Query: 995  PTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASAR 1054
                            G+ E   + +S+V +R++ L Y LP   ++K  ++   V   A+
Sbjct: 972  ---------------FGVHEEYIYDASYVKLREVRLGYTLPSKLMAKWPIHSANVAFIAK 1016

Query: 1055 NIGFLYNNAPDNLNVNDFTSTGAGGAFLGGG-TPYVRTFGLGI 1096
            N+  +++N  D L+ ++F + G G ++   G  P VR++G  I
Sbjct: 1017 NLWLIHSNV-DGLDPSEFAAGGNGYSYFEAGLLPGVRSYGFNI 1058