Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1068 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  421 bits (1081), Expect = e-121
 Identities = 338/1135 (29%), Positives = 527/1135 (46%), Gaps = 121/1135 (10%)

Query: 12   LLLCMATISAFAQKT-VSGTVTDNQGL-PLAGVSVFLKGTTKGTSTSTEGKYTLSVPSNS 69
            LLLCM    +FAQ T V+GTVT  +   P+ GVS+ +KGT++G  T  +GKY+L VP+  
Sbjct: 9    LLLCMFLQYSFAQTTSVTGTVTSAESEEPVPGVSILVKGTSRGAVTDLDGKYSLEVPAGG 68

Query: 70   TI-VFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKG 128
             + +F ++G   +EV + +   I+V +  DA+ L EVVVT LG ER+   L YA  ++ G
Sbjct: 69   EVLIFSFIGMTTQEVPINNRTVIDVAMASDAEELSEVVVTALGIERSKNELPYAAQSVDG 128

Query: 129  DQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGV- 187
            +++      N I  L G V G+ ++       SS    IRG+SSL G+ N  L V+DGV 
Sbjct: 129  EKLNETRDPNFINQLSGRVAGLNIKSSNNLGGSS-NVVIRGSSSLTGN-NQALFVIDGVP 186

Query: 188  ----ILSDDAMSPARAGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLIT 243
                I + +  +  R G  D+GN    IN DDI S++VLKG + TALYGSRA NGV++IT
Sbjct: 187  VDNSITNTNNQATGRGG-YDYGNAASDINPDDIASVNVLKGAAATALYGSRASNGVVVIT 245

Query: 244  TKKGFAQKGLGISFSHDETFD----NAYALPDMQQEYGSGFTPRDFIKGANGMN-QINSA 298
            TKKG   KG G++ +   TF     + YA    Q EYG+G+    +     G +  I   
Sbjct: 246  TKKG--SKGFGVTVNAGVTFGKIDKSTYA--KYQNEYGAGYGSSFYNADLEGFDPNIPFY 301

Query: 299  SYG--FSFGPKLDGSTILDIDGRQISNSIL----------NNPLSLYETGRYVNSNISMQ 346
             YG   S+G   DG  + D      ++             N P+  +E+    +++I + 
Sbjct: 302  YYGDDASYGEAFDGRMVYDWKSVNPASEFYQQATPWQAARNTPVEFFESPVSTSTSILLN 361

Query: 347  GGNEKTTFRFSYANNFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFNPQ 406
            GG +K  ++  Y  N  +GI P +++ ++  NF G+  + + +   A+ ++S   G    
Sbjct: 362  GGTDKGYYKLGYTRNDQEGILPNSRMKKNIVNFSGSYDIVEKLTATASINFSMNEGLGRY 421

Query: 407  RI--SGDNSLIYGLTWGYPTNFDLDYWKDNYIDPVNGGRST---------VDPFTTNQLF 455
                SG N       W +P N D+   +  Y      G +T         V  +T N  +
Sbjct: 422  GTGYSGLNVNQSFRQW-WPVNVDIKELESEYF--ATNGNATWNWSNETAQVPAYTDNPYW 478

Query: 456  FRLNKFSQIQNENNFR--GTINAKTNFTKWLQLETSASLNWYNTNKEDR-ELGQ-DPGFK 511
             R   +   QN+   R  G +      T W+ +    SL+ Y+  +E+R  +G  DP   
Sbjct: 479  TRYENY---QNDERIRTLGYMALNYEVTDWMDVMGRISLDTYSEIQEERIAVGSLDPS-- 533

Query: 512  GGYYGSGIRNVIDSRYRAGLNLNHKVN-DFDLFLQLGSEVVRSQSKGANYGTSGGLKVPA 570
               Y    RN  +  Y   +N N ++N D D    LG  + ++Q    +  T+GGL VP 
Sbjct: 534  --NYSRFNRNYKEFNYDLLMNFNKQINEDLDFKGLLGGNIRKTQINSIDASTNGGLVVPG 591

Query: 571  QYRLSNSINT---PTVGEGTPNISQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNG 627
             Y LSNS+N    PT  E T  ++ VFA     +  Y+++L L+   R++  S+L   N 
Sbjct: 592  LYSLSNSLNPMSPPTEVESTLQVNGVFAG---ATFTYRDYLILDGTVRRDQASSLAPENN 648

Query: 628  TGNYNYFYPGADLAWIFTDALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQ 687
            T    Y+YP     +IF++ L    VF++GKLRA+Y      T   +     Y K + + 
Sbjct: 649  T----YYYPSVSGGFIFSEFLNNKEVFTFGKLRANYAEVSN-TAAPQVLQDIYYKPTAFD 703

Query: 688  AVNSNTANIEQYGFDSQTLGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQI 747
                   ++  +   S    NPDL P R  S EIG E+       G D T Y   T +QI
Sbjct: 704  -------DVPLFSMPSSK-NNPDLLPERTKSFEIGAEMTFMDAAYGFDVTYYDTRTVDQI 755

Query: 748  INLSVPSESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAP 807
            I ++  + +G  +R +N+G++Q+ G E    GTPI+ Q FSW    N+T+N++K++SL  
Sbjct: 756  IPVTTSTATGFSSRYVNAGELQNAGWEISAFGTPIQNQDFSWTINVNWTKNKSKVLSLNG 815

Query: 808  GVTTVQLEGGDGIRTI-AKVGGEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAG 866
                ++L    G  T+ A VG  Y T+                        G+  +    
Sbjct: 816  DNQNLELASLQGGVTLNAAVGQPYGTI-----------------------RGRDFVYDTE 852

Query: 867  TGGAFYTRASNYANGLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDT 926
            TG         Y    ES   IG   P +YG I N FTYK++SL+ LID + GG VFS  
Sbjct: 853  TGQRMVDEDGRYMVTNESNRVIGDINPDWYGGINNSFTYKNISLAFLIDVQKGGDVFSLD 912

Query: 927  YFYGSQTGNLKNTLFGRTVENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQ 986
             +YG  TG    T              + GN +   V +   + G I+ GV+  G  +  
Sbjct: 913  RWYGDATGIYPET----------AGLNDLGNPKRDPVTNDASSGGIILPGVDANGQPNTT 962

Query: 987  AIDKGLRIPTITWRYYNNSNGWGNGIRERGAFKSSWVAVRDITLSYDLPKAFVSKIK-MN 1045
             +D           +       G        + +S+V +R++++SY  P+  V +IK + 
Sbjct: 963  RLDIS--------SFGELGYAPGTNPNSMYVYDASYVKLRNLSISYSFPRDLVDRIKGVQ 1014

Query: 1046 GVKVYASARNIGFLYNNAPDNLNVNDFTSTGAGGAFLGGGTPYVRTFGLGINGSF 1100
            G+ +    RN+  ++ N   + +  +    G    +  G  P  +T+G  +   F
Sbjct: 1015 GIDLSLIGRNLWIIHKNMKYS-DPEESLGAGNNQGYQSGAYPTTKTYGFNLRLKF 1068