Pairwise Alignments

Query, 633 a.a., ATP-dependent RNA helicase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 502 a.a., ATP-dependent RNA helicase from Agrobacterium fabrum C58

 Score =  293 bits (750), Expect = 1e-83
 Identities = 156/365 (42%), Positives = 240/365 (65%), Gaps = 10/365 (2%)

Query: 5   FQLLGISDDVVNAVKDLGFETPTPIQEQSIPVLLEGTNDFVGLAQTGTGKTAAFGLPLLE 64
           F  LG+S+ +V +V  LG+ TPTPIQ ++IP+LLEG  D +GLAQTGTGKTAAFGLP++E
Sbjct: 16  FNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEG-RDLIGLAQTGTGKTAAFGLPIIE 74

Query: 65  LIDFKVNKP-----QALILCPTRELCLQIANDLKNFSKNVANAHVVAVYGGANIMQQLRE 119
           ++  + ++P     + LIL PTREL  QI ++L++F K      +  V GGA+I +Q  +
Sbjct: 75  MLMKQADRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTP-LRINQVVGGASINKQQLQ 133

Query: 120 IRQGVQIVVATPGRMLDIIGRKAIDFTNVKYVVLDEADEMLNMGFQDDINDILSTTPDDK 179
           + +G  I+VATPGR+LD+I R AI  + V Y+VLDEAD+ML++GF  D+  I    P  +
Sbjct: 134 LEKGTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIHDLRKISRMVPPKR 193

Query: 180 KTWLFSATMPAEVRRIAKNYMDNP--VELTMGTKNTGNVNIEHEYYIVRARDKYAALKRI 237
           +T LFSATMP  +  +A N++ +P  VE+T   K    V  ++ +++    DK   LK+ 
Sbjct: 194 QTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVE-QYVHFVAGKNDKTDLLKKS 252

Query: 238 VDFNPEIFAVVFCKTKLDTQDVAEHLIKDGYNADALHGDLSQQQRDKVMQRFRERNMQLL 297
           ++ NP+  ++VF +TK   + + +HL   G+   ++HG+ SQ QR++ ++ F++  +++L
Sbjct: 253 LNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERALKGFKDGEIKVL 312

Query: 298 IATDVAARGIDVNNVTHVVNYSLPDEIESYTHRSGRTGRAGKTGISICIINSKELGKIRQ 357
           +ATDVAARGID+  VTHV NY LP+  ++Y HR GRT RAG+ GI+I      E   +  
Sbjct: 313 VATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDETRLLHD 372

Query: 358 LERII 362
           +E+++
Sbjct: 373 IEKLM 377