Pairwise Alignments

Query, 186 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 183 a.a., RNA polymerase sigma factor from Phocaeicola dorei CL03T12C01

 Score =  208 bits (529), Expect = 5e-59
 Identities = 90/179 (50%), Positives = 135/179 (75%)

Query: 1   MKQVEDSEILAMFAVERTRNEAFNLLLKKYQQKIYWHIRRLVLNHDDCDDLLQEVFVKVW 60
           M    + EI+A+      + EAF  ++ +Y +++YW IRR+VL+H+D +DLLQ  F+K W
Sbjct: 1   MNTYNEKEIIALLQDPARQKEAFECIVNEYSEQLYWQIRRMVLSHEDANDLLQNTFIKAW 60

Query: 61  KNLDKFRSDSQLYTWIYRIATNESITFLNKQKQRNNTPLDEVSSELADNLVASSYFNGDK 120
            NL+ FR+++++ TW+YRIA NE +TFLNKQ+  N   +D+  +++ + L + +YFNGD+
Sbjct: 61  TNLEYFRAEAKMSTWLYRIALNECLTFLNKQRATNQLSIDDGDADMVNKLESDTYFNGDE 120

Query: 121 LELKLQKAILTLPEKQRIIFNMKYFDDMKYEEISEVLGTSVGALKASFHIAAKKIEAFI 179
            ++  QKA+LTLPEKQRI+FN+KYF +MKYE++SE+LGTS+GALKAS+H A KKIE F+
Sbjct: 121 TQILFQKALLTLPEKQRIVFNLKYFQEMKYEDMSEILGTSIGALKASYHHAVKKIENFL 179