Pairwise Alignments

Query, 231 a.a., DNA-binding response regulator from Pedobacter sp. GW460-11-11-14-LB5

Subject, 239 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 71/239 (29%), Positives = 127/239 (53%), Gaps = 20/239 (8%)

Query: 4   LIVDDHVIARRVVSHLLQVDPALKLIAECENAAEAYRNLAVHKI--DLLLLDIEMPGISG 61
           LIVDD  +AR  +   LQ    ++++ EC NA E     AVHK+  D+L LDI+MP ISG
Sbjct: 5   LIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIG--AVHKLRPDVLFLDIQMPRISG 62

Query: 62  IELVKGLG-DTRPLIIFITSKKDYAATAFDLNVVDFITKPITPDRFLIAINKAKEIHNIQ 120
           +E+V  L  + RP I+F+T+  +YA  AF+ +  D++ KPI   R    + + ++  + Q
Sbjct: 63  LEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQ 122

Query: 121 NLFL---NNQQDDFVFIRDSGVIRRIKLDDINYLEAK--GDYVKIYLNEKVYSVHSSLKS 175
           ++ L   N Q   F+       I  +++ D+ ++ ++  G YV  +  ++ ++   +L++
Sbjct: 123 DVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFT-ELTLRT 181

Query: 176 IEDKLPGQTFLRVHRSFIINVGKI------DTVEGNTLIMHKNFVPVSDAYKMILNKRI 228
           +E + P    LR HR +++N+  +      D  +   ++ +   VPVS  Y   L + I
Sbjct: 182 LESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAI 237