Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1034 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  321 bits (823), Expect = 2e-91
 Identities = 300/1092 (27%), Positives = 473/1092 (43%), Gaps = 103/1092 (9%)

Query: 8    MAKKYILNLLLLMTL--TVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMASTATRAIG 65
            M +KY+L ++ ++     +LG  A+     +V G V+   D  G+P V ++   +     
Sbjct: 8    MPRKYLLGIMSMLCTFGILLGQRAYGFQDRTVSGTVISGTDQLGLPGVNVLLKGSQTGT- 66

Query: 66   MTRDDGTFTVSVPD--NATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITVGY 123
            +T  DG +++SVP+  N  L F  + ++     +   N + I + ED++ L+EV + VGY
Sbjct: 67   ITDIDGNYSLSVPEGGNIVLVFSMIGFEKQEATVGNNNHINITLSEDISALDEV-VVVGY 125

Query: 124  GQKTKETVMGAVTSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSINMRGLS 183
            G   K  + G+V +L+ +D     +++  +L   K+PG+ +  N+  PG   S+N+RG+ 
Sbjct: 126  GTVKKSDLTGSVAALKKEDFNPGVITSAEQLIAGKMPGVQVVQNSAEPGGGISVNIRGVG 185

Query: 184  GISVTGSGDNAFLTPTSPLFVIDGVPVDLN---TDYQYGFSSNGPGISPLSLIPAEDIDE 240
             ++   SG+       SPL+VIDG+P   +   T     F +     SPLS I   DI+ 
Sbjct: 186  SVN---SGN-------SPLYVIDGLPFSNSSAVTGVGDRFGAPRTQRSPLSSINPADIES 235

Query: 241  ILFLKDASATALYGAQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAAES 300
            I  LKDASATA+YGA+GA GVIL+ T+ G+     I Y             +++ G    
Sbjct: 236  IEVLKDASATAIYGARGANGVILVTTKNGRKGKMSINYDAYAGVQNVANKIELLSGR--- 292

Query: 301  NLRLWEIYTYGANIYSARQSVDNTPMLADSLNAFYNNSTDWQSIFYRSTYN-QQHNVNAS 359
                 E Y     I       +      D +  F    TDW    Y+     Q HN++ S
Sbjct: 293  -----EYYEVINAIIDEGGGSEQ-----DRVEDFNGTGTDWLGEVYQPNAGIQSHNLSMS 342

Query: 360  GGDDSFNYKINLGYYDEKGIQENTGFTRYSLSMNTRYKPSPKFNVNLILSSSLGNSQKGS 419
            GG++S NY ++L Y+D+KG+  N+GF RY + +N  +K S +F + L +SS+    +   
Sbjct: 343  GGNESTNYMVSLNYFDQKGLIINSGFKRYGIRLNLDHKASERFKMGLNMSSNYSRDEFTP 402

Query: 420  GNGIL--QTGVASGA-GSSSLLP-----GPNLINSNAALGALIVDNDNKAGNIKT----- 466
            G   L    GV   A      LP     G  +I+S+  +   +   + K G   T     
Sbjct: 403  GGFQLNEHAGVVFAAMHMDPTLPIRNDNGDYVISSHINIDNPVALANGKRGIGNTYRTFG 462

Query: 467  SVEARYEFLTGLAVSNITSYDYSMGTTETF-NPAILNNNVAG--VYSYNDKRSTLYNRAM 523
            ++   Y+ L GL+       D S    E + + + L+ N AG          S      +
Sbjct: 463  TIYGEYKILPGLSAKLNIGGDVSNQVREFYIDRSTLDGNAAGGIASQLQGTSSNYLVEGL 522

Query: 524  VSFNKSLQKDVHNIGAYVFSEVY-VRNFQAHAIQQDQYTNDQYQGPFGSASASSGGGVLD 582
            +++ K + +D  +    V ++ + V  F A          + Y    G+ S +    V  
Sbjct: 523  LNYTKDIGQDSFSAVVGVTTQKFIVSRFSAEGRGFPSDATETYNLGLGNPSLNV---VSS 579

Query: 583  NYSDSRAASLAASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKENFL 642
            +  D+   S  A  +Y+ + KYL+ A+ R DG+S  G N  +   PS A  W  N+E F 
Sbjct: 580  SKVDNTLLSYLARANYSLRNKYLLTASIRADGSSRFGQNNKFGYFPSFAFGWKVNQEEFF 639

Query: 643  ADSKWL-DVGMLRLSWGRNIAPVGNVFDAN-GTYDYYGN-----YNGIPTTAVDFNNLPN 695
               + L      R SWGR     GN    N  +   +GN     Y+    T      + N
Sbjct: 640  KPLEPLFSTLKFRASWGR----TGNQEIGNYRSISTFGNGPVVVYDDQQYTTTQPARIAN 695

Query: 696  IKLLPTTTTQYNAGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAFTKLKTNEVSN 755
              L   TT Q N GLD  L+ +R+  + D Y K   + L    I   + FT   TN    
Sbjct: 696  PDLKWETTEQVNFGLDYGLWDDRLYGSLDWYVKNTSDMLLSLPIPRSSGFTSQLTNIGGI 755

Query: 756  VNYGYELALSFRPLPASSKVNWSVSINGAYNKEKITALPDATRQLLLDGGATGQAILYRL 815
             N G+E  L+ R +    + +W  +I     K K+T L    R +    GAT Q  +   
Sbjct: 756  QNSGWEFGLTSRNI-TKQRFSWVTNIALTTVKNKVTDLGGINRIITGSAGATSQIAIIEE 814

Query: 816  GRNSLTNILYNFKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGDPYYADINGDYVLD 875
            G    +   Y   G++   DD               G+T    + GD  Y D+NGD V++
Sbjct: 815  GLPLESFYGYEVLGIWQEGDDY--------------GATEDPVQPGDIKYKDVNGDGVVN 860

Query: 876  AKDMVGAGNSQPLINGGISSYASYKGFSLNVIMAYTWHRDILNNPLAASFQNFSSPFSAN 935
            A D V  GNS P +   I +   +K   L V +       +LNN L  ++  F +    N
Sbjct: 861  ADDRVVLGNSFPDLIWSIGNTFKHKSLELYVFLEGVQGAKMLNNGLIDTY--FPAGVRRN 918

Query: 936  NLV-PITEYNIWRQSGDIANYPNPYDYLRYGSYSATDKSTQFLPFRYNQTLFQEDGSYLK 994
                P+   N W        +P+       G      K+              ED SYL+
Sbjct: 919  RYAEPL--LNRWTPENPTNEFPSFVRTSAQGEKRVNSKTV-------------EDASYLR 963

Query: 995  LATVTVGYTFKPELTKRLGITSLRVYGTANNIHTFSFYSGADP---ENVSSLGRDNSGGY 1051
            L+TV + Y+  P   K     S++ Y T  N+ T + YSG DP    N S+  R +   Y
Sbjct: 964  LSTVRLSYSL-PFNGKT--FRSMQFYITGQNLFTITDYSGMDPAINPNGSANFRIDWNAY 1020

Query: 1052 PVRRTYALGLNI 1063
            PV RT+  G+++
Sbjct: 1021 PVARTFTGGISL 1032