Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1027 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  358 bits (920), Expect = e-103
 Identities = 305/1086 (28%), Positives = 508/1086 (46%), Gaps = 97/1086 (8%)

Query: 9    AKKYILNLLLLMTLTVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMASTATRAIGMTR 68
            AK +   L++L+ + V   S +AQ   +V G V D   G  +  V+++    ++ + +T 
Sbjct: 10   AKSWFSALVILLNM-VWSFSLFAQGK-NVTGVVKDGESGDPLVGVSVLVKGTSKGV-VTD 66

Query: 69   DDGTFTVS-VPDNATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITVGYGQKT 127
             DG +++  V     L F YL Y    I +  ++ + + +V + + L+EV I VGYG + 
Sbjct: 67   LDGAYSIQDVSTEDVLMFSYLGYSMKEIPIGSRSVIDVELVSNTSDLDEVVI-VGYGVQE 125

Query: 128  KETVMGAVTSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSINMRGLSGISV 187
            K  + GA+ S+  ++++   V +   L Q +  G+ + +N+G+PG   +IN+RG S ++ 
Sbjct: 126  KRNLTGAIASVGSEEVRKTNVQDPISLLQGRAAGVQVTSNSGAPGGGMTINIRGNSSLN- 184

Query: 188  TGSGDNAFLTPTSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDIDEILFLKDA 247
              +G+N       PL+V+DGVP++ N       S N  G++PL+ I   DI+ I  LKDA
Sbjct: 185  --AGNN-------PLYVVDGVPIETNVTSSLNGSENF-GLNPLAAINPADIESIEILKDA 234

Query: 248  SATALYGAQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAAESNLRLWEI 307
            S+TA+YG++ A GV+LI T+RGK     I  + +   +   +   V+     S  R   +
Sbjct: 235  SSTAIYGSRAANGVVLITTKRGKDGKAQINLNVHSGVSQITRKLDVLNA---SQYRSAVL 291

Query: 308  YTYGANIYSARQSVDNTPMLADSLNAFYNNSTDWQSIFYRSTYNQQHNVNASGGDDSFNY 367
             +Y AN    R+ +     + DSL++  N   DWQ    R       +++  GG ++  Y
Sbjct: 292  DSY-ANSDDGREPIF---AVVDSLSSTNNGDVDWQRELLRKAVQTSVDLSVQGGSENVRY 347

Query: 368  KINLGYYDEKGIQENTGFTRYSLSMNTRYKPSPKFNVNLILSSSLGNSQK----GSGN-G 422
              +  + D+ GI  N+ + R +  +N  +  + +  V   +S S G + +    G+GN  
Sbjct: 348  AWSSSFLDQDGIVLNSNYRRITSRLNVDFNVTDRLTVGQSISYSNGVNNRINAAGTGNLS 407

Query: 423  ILQTGVASGAGSSSLLPGPNLIN-----SNAALGALIVDNDNKAGNIKTSVEARYEFLTG 477
            I++  +      S  LP  +L        N    A +  N NK+  I       Y+   G
Sbjct: 408  IIRELLIRPPSYSMYLPDGSLNGYQFGKRNPVGLAELSTNLNKSNRIIAGQYLEYKLAEG 467

Query: 478  LAVSNITSYDYSMGTTETFNPAILNN----NVAGVYSYNDKRSTLYNRAMVSFNKSLQKD 533
            L      + D+     +TF P+ L+     N   V S N+   T  N  ++++ K +   
Sbjct: 468  LKFRTSVNVDFLSMKEDTFIPSTLDYREGYNTGSVRSTNNL--TWSNENILTYQKQVDGK 525

Query: 534  VHNIGAYVFSEVYVRNFQAHAIQQDQYTNDQYQGPFGSASASSGGGVLDNYSDSRAASLA 593
             HN+G  +       +++   +    + +D  +         +G G + N   + A S +
Sbjct: 526  -HNLGGLLGFSYQDWDYERTGLDGMFFPSDDIR-------TLNGAGTISNQEVNIATSHS 577

Query: 594  -----ASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKENFLADSKWL 648
                   +SY+Y+ +YL EA  R DG+S  G +  +   PS ++ W F+ E FL  +  L
Sbjct: 578  LLSYFGRVSYDYERRYLFEANLRADGSSRFGRDNRFGFFPSASVGWRFSDEPFLNGAGVL 637

Query: 649  DVGMLRLSWGRNIAPVGNVFDANGTYDYYGNYNGIPTTAVDFNN-----LPNIKLLPTTT 703
            D G LR S G+     GN  +A G Y   G +  +    +D++      +PN  L   TT
Sbjct: 638  DDGKLRFSAGQT----GN--EAIGNYTSQGEFM-VGANYLDYSGAAPTVMPNSGLSWETT 690

Query: 704  TQYNAGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAFTKLKTNEVSNVNYGYELA 763
            TQYNAG+DL  ++ R+ L  D Y K   + L+   I     F  +  N     N G E+ 
Sbjct: 691  TQYNAGMDLAFWQGRLGLTVDAYIKDTKDLLYNVPIPRETGFGYITQNIGKIRNKGIEVL 750

Query: 764  LSFRPLPASSKVNWSVSINGAYNKEKITALPDATRQLLLDGGA-TGQAILYRLGRNSLTN 822
            L+   + A+    WS S+N + N   +  LP+   +LL +G    G   + + G    T 
Sbjct: 751  LNTHNV-ATRHFTWSTSLNISKNTNIVKELPE---ELLTNGFIQNGNFHILQEGYPIGTF 806

Query: 823  ILYNFKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGDPYYADINGDYVLDAKDMVGA 882
              + F GV++ D+D      NG      NGS    F+ GDP + D+NGD V+D  D    
Sbjct: 807  YGWRFDGVYARDED----NINGVT----NGSQGPVFEGGDPIWHDLNGDNVIDQNDRQVI 858

Query: 883  GNSQPLINGGISSYASYKGFSLNVIMAYTWHRDILNNPLAASFQNFSSPFSANNLVPITE 942
            GN+ P   GGI++  SYK FSL+ +  +++  +I      +   +  +     N +    
Sbjct: 859  GNATPDFFGGITNDLSYKNFSLSFMFQFSYGGEIY-----SEINHQRNSIVRYNNLSTAA 913

Query: 943  YNIWRQSGDIANYPNPYDYLRYGSYSATDKSTQFLPFRYNQTLFQEDGSYLKLATVTVGY 1002
             + WR+ GDI ++P P       S S              Q+ + EDGSY+KL  V + Y
Sbjct: 914  LDRWREQGDITDFPKPVQDDPLQSDSRI------------QSRWVEDGSYIKLKNVNLRY 961

Query: 1003 TFKPELTKRLGITSLRVYGTANNIHTFSFYSGADPENVSSLGRD---NSGGYPVRRTYAL 1059
            +   EL  R+G++ L  Y T  N+ T++ Y+G DP+  S  G     + G YP  RT  +
Sbjct: 962  SLPLELVNRIGLSRLDAYVTGTNLVTWTNYTGFDPDVSSYSGLRIGVDEGSYPQSRTVIV 1021

Query: 1060 GLNIQL 1065
            GL+I L
Sbjct: 1022 GLSIGL 1027