Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1024 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  270 bits (690), Expect = 4e-76
 Identities = 278/1104 (25%), Positives = 462/1104 (41%), Gaps = 146/1104 (13%)

Query: 16   LLLLMTLTVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMASTATRAIGMTRDDGTFTV 75
            LL    L +L   A     I+V G V    DG+ +P V I+     +   ++  DG +++
Sbjct: 11   LLFAQLLLLLFHGAAYGQQITVSGTVTSGEDGTTLPGVNILLKGTGKGT-ISDIDGKYSI 69

Query: 76   SVPDNATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITVGYGQKTKETVMGAV 135
            +VP   TL F ++ YK   + +  +  L + M  DL  L+EV + VG+G++ K T+ GAV
Sbjct: 70   TVPSTGTLVFTFIGYKSREMAIGNRTVLDVEMGPDLQALDEV-VVVGFGEQKKATMTGAV 128

Query: 136  TSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGA-APSINMRGLSGISVTGSGDNA 194
             S+  K++   PV+N++     ++PGL    ++G PG    S+ +RG++ ++     D  
Sbjct: 129  ASIGDKELVQSPVANISNSLVGRLPGLIAVQSSGEPGYDQSSLKIRGIATLNTGAESD-- 186

Query: 195  FLTPTSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDIDEILFLKDASATALYG 254
                  PL ++DGV                   S L+ I   +I+ +  LKDASATA++G
Sbjct: 187  ------PLILVDGVQR-----------------SNLNQIDPHEIETLSILKDASATAVFG 223

Query: 255  AQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAAESNLRLWEIYTYGANI 314
             +GA GVILI T+ G    P I Y+ NF   +P  L  ++     + LR       G   
Sbjct: 224  VRGANGVILITTKTGSKGKPEINYTANFGLQSPNSLPDLLDSYQYAMLRNEASVNSGQEP 283

Query: 315  YSARQSVDNTPMLADSLNAFYNNSTDWQSIFYRS-TYNQQHNVNASGGDDSFNYKINLGY 373
            Y +  S++   +  +  + +++ + DW  +  +  +  QQHN N SGG D+  Y ++LGY
Sbjct: 284  YFSESSLE---LYRNGGDPYFHPNVDWFDLVLKDYSAQQQHNFNISGGTDNTRYFVSLGY 340

Query: 374  YDEKGIQE----------NTGFTRYSLSMNTRYKPSPKFNVNLILSSSLGNSQK---GSG 420
            +D+ G  +          N  F RY+   N     +  F+ ++ LS    +S     G+G
Sbjct: 341  FDQNGAYDVQDVQTAYSANPKFKRYNFRSNFDIDFNKDFSASVKLSGQFTDSNYPGYGAG 400

Query: 421  ---------NGILQTGVASGAGSSSLLPGPNLINSNAALGALIVD----NDNKAGNIKTS 467
                     N ++  GV  G   S +   P+  +S + L A++ +    N     N   S
Sbjct: 401  EIFFRILNSNPMMNPGVIDGKLISGVEGLPS--SSGSPLDAIVNNGYQRNFGSTMNTNVS 458

Query: 468  VEARYEFLT-GLAVSNITSYDYSMGTTETFNPAILNNNVAGVYSYNDKRSTLY----NRA 522
            ++ +  F+T GL+V  + +YD       + +   +   +  V    D    ++      A
Sbjct: 459  LKHKLGFITEGLSVRGMVAYDNYYQHNVSRSKESMKYRI--VKDPEDPTQPVFLPQGMDA 516

Query: 523  MVSFNKSLQKDVHNIGAYVFSEV-YVRNFQAHAIQ-QDQYTNDQYQGPFGSASASSGGGV 580
              SF +S  +   N   Y    V Y R+F  H I     Y  ++Y  P    +   G   
Sbjct: 517  PFSFGESYGR---NRKTYFEGAVDYSRSFGQHNITGMALYMQERYTAPGQEYNVPRG--- 570

Query: 581  LDNYSDSRAASLAASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKEN 640
                       L   ++YN++ KYL E     +G+ +      +   PS +L W   +E+
Sbjct: 571  --------YQGLVGRVTYNFKEKYLSEFNMGYNGSENFPEGKRFGFFPSFSLGWVLTEES 622

Query: 641  FLADSKWLDVGMLRLSWGRNIAPVGN-------------VFDANGTYDYYGNY--NGIPT 685
            F+    +L    +R S+G     VGN             VF  N    ++G Y  N    
Sbjct: 623  FIPTGDFLSYVKIRGSYGE----VGNDKIGGARFLYLPSVFYPNSGGYHFGQYGDNYQWY 678

Query: 686  TAVDFNNLPNIKLLPTTTTQYNAGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAF 745
            +      + N  +      ++N G++   F +++ +N D + +  DN LW          
Sbjct: 679  SGSQEGRVGNPDVTWERAKKFNLGIETGFFGDKLRINADIFAEKRDNILWYLGTVPDLVQ 738

Query: 746  TKLKTNEVSNV-NYGYELALSFRPLPASSKVNWSVSINGAYNKEKITAL--PDATRQLLL 802
              L    +  V N G+EL ++F       K  + V  N +  K KI  +  P+   + L 
Sbjct: 739  ADLPPVNIGKVENKGFELEVNFNDQIGEFK--YWVKSNYSLAKNKILYMDEPNRAHEWL- 795

Query: 803  DGGATGQAILYRLGRNSLTNILYNFKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGD 862
                TG  +    G  S         G ++T++++   P +         +     + GD
Sbjct: 796  --QRTGHPVGQYWGLQS--------DGFYNTEEELASAPTS---------AFTAELQVGD 836

Query: 863  PYYADINGDYVLDAKDMVGAGNSQ-PLINGGISSYASYKGFSLNVIMAYTWHRDILNNPL 921
              Y D N D  +D  D V  GNS  P +  G+S    YKGF  +V+           + +
Sbjct: 837  IRYVDQNDDGTIDQYDEVPIGNSNFPQVIYGLSFGGQYKGFDFSVLFQGADRVSTYIDQM 896

Query: 922  AA-SFQNFSSPFSANNLVPITEYNIWRQSGDIANYPNPYDYLRYGSYSATDKSTQFLPFR 980
             A +F       ++ +L        W Q     N P  Y  +     S T     + P  
Sbjct: 897  GAWAFDTDWRNATSRHL------ERWTQERYEQNLPISYPRV---ELSPTSGKHNYRP-- 945

Query: 981  YNQTLFQEDGSYLKLATVTVGYTFKPELTKRLGITSLRVYGTANNIHTFSFYSGADPENV 1040
                 + ED SY++L    + Y F+     RLG+T+LRV+   NN+ T+S     DPE  
Sbjct: 946  --SDFWLEDASYIRLKNAEIAYNFQSRFLNRLGVTNLRVFANGNNLLTWSDMVNFDPEAP 1003

Query: 1041 SSLGRDNSGGYPVRRTYALGLNIQ 1064
            +  G    G YP  R Y LGLN++
Sbjct: 1004 AGRG----GFYPQMRVYNLGLNVR 1023