Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1045 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  280 bits (716), Expect = 4e-79
 Identities = 270/1101 (24%), Positives = 476/1101 (43%), Gaps = 143/1101 (12%)

Query: 18   LLMTLTVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMASTATRAIGMTRDDGTFTVSV 77
            +++ L++    A       + G V+   D   IP  T++   +     +T  DG FTV V
Sbjct: 33   VIILLSIHVPQAVLAQTAEISGTVISGEDQQPIPGATVLVKGSGTGT-VTDLDGNFTVKV 91

Query: 78   --PDNATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITVGYGQKTKETVMGAV 135
              P  A L+  ++ Y    I +N ++ +++ +  D++ L+EV + VGYG+  ++ + G+V
Sbjct: 92   NEPATAVLSISFVGYVTQEISVNNQSTIQVELDPDVSQLDEV-VVVGYGETKRKDLTGSV 150

Query: 136  TSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSINMRGLSGISVTGSGDNAF 195
             S+  K+IQ+    N  +  Q +V G+NIQ     PG   ++ +RG + I+   + +   
Sbjct: 151  VSMDSKNIQEANKVNAFQALQGQVAGVNIQAADNKPGGGFNVRIRGSNTINANETVEQGG 210

Query: 196  LTP-TSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDIDEILFLKDASATALYG 254
              P  +PLFV+DG+ V+                  +S +   DI+ +  LKDASATA+YG
Sbjct: 211  FNPGQNPLFVVDGIFVN-----------------DISFLNPADIERMDVLKDASATAIYG 253

Query: 255  AQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAAESNLRLWEIYTYGANI 314
            ++G+ GV++I T++G      +QY           L  ++ G  E  ++ +     G   
Sbjct: 254  SRGSNGVVIIETKKGSEGKMTVQYDNYIGVKEAYNLPDMLQG--EEFVQYFRDAVVGNFY 311

Query: 315  YSARQSVDNTPM-LADSL------NAFYNNSTDWQSIFYRSTYNQQHNVNASGGDDSFNY 367
             S   SV+   + L+D +      N    +  +W  +   +   Q H ++ +GG+D   Y
Sbjct: 312  ASGDFSVNAGDVNLSDYMRPNELENVANGDYVNWIDLIQHNGMQQNHTLSLNGGNDKTVY 371

Query: 368  KINLGYYDEKGIQENTGFTRYSLSMNTRYKPSPKFNVNLILSSSLGNSQKGSGNGILQ-- 425
             I + Y  ++G  E   + RY++  N   K S  F+V     +S     +GS  G+    
Sbjct: 372  GIGVAYTQDEGTFEGEDYERYTIRGNLSSKLSDLFSVAFNNYASFAIRNEGSREGLRSAY 431

Query: 426  ----TGVA---SGAGSSSLLPGPNLIN-------------------SNAALGALIVDNDN 459
                TG     +G      L G   I                    SN +L    V+N  
Sbjct: 432  RLRPTGTPFDENGDPQFFPLQGETFITNPLFEPDNITRETRTLNYLSNLSLSFTPVENLK 491

Query: 460  KAGNIKTSVE-ARYEFLTGLAVSNITSYDYSMGTTETFNPAILNNNVAGVYSYNDKRSTL 518
             + N   ++E +RY    G    + +      G T     A +NN     Y++++     
Sbjct: 492  ISSNFSPNIEFSRYGEYRGRYAKSTSG---QQGNTR----AEVNNRNRISYTWDN----- 539

Query: 519  YNRAMVSFNKSLQKDVHNIGAYVFSEVYVRNFQAHAIQQDQYTNDQ---YQGPFGSASAS 575
                +V++N     D H +       +++  ++ + +Q+  Y  D+   Y    GS   +
Sbjct: 540  ----IVNYNLEFGSD-HRLNTTFVYSLFMDRYENYLMQRRNYGTDEFLFYNIDAGSDLRT 594

Query: 576  SGGGVLDNYSDSRAASLAASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWN 635
            + GG    +S     S  A ++Y ++ KYL+  T R DG+S       WA  PS A  W 
Sbjct: 595  ADGG----FSKQTLESYTARVNYAFKDKYLLTLTGRYDGSSILAEQNKWAFFPSAAFAWR 650

Query: 636  FNKENFLADSKWLDVGMLRLSWGRN--------IAPVGNVFDANGTYDYYGNYNGIPTTA 687
               E F+ D  ++    LRLS+G          + P+G++      +   G+     T  
Sbjct: 651  IIDEGFMQDQNFIADLKLRLSYGETGNNGTGGGLVPLGSLSLIGNNFTNIGDQ---VTQT 707

Query: 688  VDFNNLPNIKLLPTTTTQYNAGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAFTK 747
                NL N  L    T ++N GLD   F NR+  + D Y++     ++ + I+T + F+ 
Sbjct: 708  AYVTNLANQDLTWEKTKEFNFGLDFGFFNNRLYGSLDIYHRKNTGIIFFRPISTVSGFSG 767

Query: 748  LKTNEVSNVNYGYELALSFRPLPASSKVNWSVSINGAYNKEKITALPDATRQLLLDGGAT 807
            +  N     N G EL L+   +       W+ S+N A N  KIT L     Q+L   G  
Sbjct: 768  VFQNVGEAENKGIELGLNSVNIHTGD-FKWTTSLNFAKNNNKITKLYGDLDQILF--GVQ 824

Query: 808  GQAILYRLGRNSLTNILYNFKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGDPYYAD 867
              + ++++G    +   Y F G++  D+      A+  + +   G  P     G     D
Sbjct: 825  AGSYVHKVGEPVGSIYSYVFDGIWQLDE------ADEAQSY---GQQP-----GQVRVRD 870

Query: 868  INGDYVLDAKDMVGAGNSQPLINGGISSYASYKGFSLNVIMAYTWHRDILNNPLAASFQN 927
            +N D  +DA D    G++ P  +GGI++  +YK +       +T+        ++AS+ +
Sbjct: 871  LNDDGSIDADDRTVIGSNMPKWSGGIANTFNYKNWD------FTFFVRTNQGAVSASYFH 924

Query: 928  FSSPFSANNLVPITEYNIWRQSGDIANYPNPYDYLRYGSYSATDKSTQ-FLPFR---YNQ 983
             S                   SG   + P  ++ L+   ++  + S + F P     +++
Sbjct: 925  IS------------------HSGGFDSTPARFNSLQTNYWTPDNPSNEWFQPSNNGPFSE 966

Query: 984  TLFQEDGSYLKLATVTVGYTFKPELTKRLGITSLRVYGTANNIHTFSFYSGADPENVSSL 1043
             L   D S++K+  +T+GY FK  +   L I +LR+Y TA N  TF+ Y G DPEN +  
Sbjct: 967  PLTYHDVSFVKVGYITLGYNFKQPVLDALKIQNLRLYFTAQNPFTFTNYEGWDPENAA-- 1024

Query: 1044 GRDNSGGYPVRRTYALGLNIQ 1064
             R++ G   + R +  G+N++
Sbjct: 1025 -RNSWGSAYMSRIFMGGINVK 1044