Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1096 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  272 bits (695), Expect = 1e-76
 Identities = 289/1135 (25%), Positives = 480/1135 (42%), Gaps = 144/1135 (12%)

Query: 16   LLLLMTLTVLGSSAWAQNLISVRGKVVDKGDGSGIPAVTIMASTATRAIGMTRD-DGTFT 74
            LL+LM + V+   A    +  V    V   +G  IP VT+M   +    G + D DG + 
Sbjct: 17   LLMLMVMGVMDLQAQTSEITGV----VRSSEGETIPGVTVMLKGS--GTGTSTDMDGAYK 70

Query: 75   VSVPD-NATLTFKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKIT-VGYGQKTKETVM 132
            ++V D N TL F  +      I +NG++ + + M  D+  L+ V++   GYG   K  + 
Sbjct: 71   LTVNDPNGTLMFSSIGMIKQEIPINGRSTIDVTMEMDVAQLDMVEVVDYGYGTVKKTDMT 130

Query: 133  GAVTSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSINMRGLSGISVTGSGD 192
            G+V S+ GK++  +PV++ A+    ++PG+ +    GSPGA   I +RG  G SVT   D
Sbjct: 131  GSVASMSGKELAKIPVASAAQAITGRLPGVRVLTTDGSPGADVVIRVRG--GGSVTQ--D 186

Query: 193  NAFLTPTSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDIDEILFLKDASATAL 252
            N      SPL+V+DG  V    D                 IP  DI+ I  LKDA+ATA+
Sbjct: 187  N------SPLYVVDGFIVGSIRD-----------------IPPTDIESITVLKDAAATAI 223

Query: 253  YGAQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQV-IGGAAESNLRLWEIYTYG 311
            YGAQ A GVI++ T+  K+    I Y+  F + + PK R+  +  A E  L  +E     
Sbjct: 224  YGAQAANGVIVVTTKTPKAGKTSISYNNFFQWKSLPKDRRYNVLNAYEYVLANYEYAKLQ 283

Query: 312  ANIYSARQSVDNTPMLADSLNAFYNN-STDWQ-SIFYRSTYNQQHNVNASGGDDSFNYKI 369
            +N  +A ++ +    + D L  +    +TDWQ  +F     +Q HN++ SGG +   + +
Sbjct: 284  SN--AAVRNFEKFYGVYDDLELYQQKPTTDWQDELFGDPKLSQYHNLSISGGTEKTKFML 341

Query: 370  NLGYYDEKGIQENTGFTRYSLSMNTRYKPSPK--FNVNLILSSSLGNSQKGSGNG----- 422
            +L    ++G+  N+G+ R  ++    ++ + +   +V   ++ ++ +    SGN      
Sbjct: 342  SLTNNTDEGLMLNSGYMRNVINFKLNHQLADRLTMDVGARVTHTVIDGAGTSGNAQISIK 401

Query: 423  -ILQTGVASGAGSSSLLPGPNLINS----NAALGALIVDNDNKAGNIKTSVEARYEFLTG 477
              +QT   +G  +  L    N INS     + L +L+   +    + +   E  Y F  G
Sbjct: 402  DAVQTRPTNGI-ADELDIDMNQINSEDDFQSFLLSLVSPVELAKQDWRKRTEYDYVFNAG 460

Query: 478  LAVSNITSYD-----------------YSMGTTETFNPAILNNNVAGVYSYNDKRSTLYN 520
            L    I + +                 Y   T E+FN    N N   +    D+ S  Y 
Sbjct: 461  LTWEVIDNLNFKSTFNGSRDFRENLRFYGPLTGESFN----NGNNMPLGQREDRSSFSYR 516

Query: 521  -RAMVSFNKSLQKDVHNIGAYVFSEVY----------VRNFQAHAIQQDQYTNDQYQGPF 569
                VS+        H++   V  EVY            +F+     ++ + N      F
Sbjct: 517  WLNSVSYKFDDLGTDHDLDFLVGQEVYSSGGKRSFLRAEDFRLSITPEELFAN----MTF 572

Query: 570  GSASASSGGGVLDNYSDSRAASLAASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPS 629
            G A         ++Y++S   SL    +Y ++ KYL  AT R D +S    +      P+
Sbjct: 573  GRADRHE----TEDYTNSNRFSLFGRANYQFKGKYLFTATVRSDASSKFSKDNRVGVFPA 628

Query: 630  LALKWNFNKENFLADSKWLDVGMLRLSWGRNIAPVGNVFDANGTYDYYGNYNGIPTTAVD 689
            +A+ W  ++E+FL  S W+D   LRLSWG      GN  D   T      ++        
Sbjct: 629  VAVGWKISEEDFLKASSWVDELKLRLSWGE----TGN--DRIETTATQFLFSASTNRGPG 682

Query: 690  FNNLPNIKLLPTTTTQY------------NAGLDLNLFKNRITLNFDTYYKMVDNQLWEK 737
            F N  N+   P+++T Y            N GLD  LFK ++  + D Y  +  + L + 
Sbjct: 683  FGNTDNVFYQPSSSTLYNPDLKWETTITKNIGLDFTLFKAKVEGSLDFYRNVTRDLLLQS 742

Query: 738  NITTHNAFTKLKTNEVSNVNYGYELALSFRPLPASSKVNWSVSINGAYNKEKITALPDAT 797
             I  +  F+    N  S  N G EL ++   +      + SV+ N   N+ ++  L    
Sbjct: 743  AIPPNTGFSTQWNNVGSTSNQGVELGINAFIID-KPDFSLSVNFNTGLNQARVEELDGTN 801

Query: 798  RQLLLDGGATGQA-----ILYRLGRNSLTNILYNFKGVFSTDDDVPVNPANG---TRYHT 849
             +      A+           R+G        Y   G ++ DD    + A G    +   
Sbjct: 802  ERFFQSNWASTDLNNINDFYLRVGGKIGDVFGYVTDGYYTEDDFEGYDAAAGEYILKADV 861

Query: 850  FNGSTPV---YFKAGDPYYADINGDYVLDAKDMVGAGNSQPLINGGISSYASYKGFSLNV 906
             N ++ V     + G     D+N D  +DA D    GN+ P   GG    A +KGF   +
Sbjct: 862  PNSTSVVGNTNIRPGFLKLKDLNDDGQIDADDRKVIGNTLPKNQGGFGVNARWKGFDAAI 921

Query: 907  IMAYTWHRDILNNPLAASFQNFSSPFSANNLVPITEYNIWR----------QSGDIANYP 956
               Y +  D+ N      +  F      N L  ++  N +             G+I    
Sbjct: 922  FFNYQFGNDVYNTG-KIQYNQFRRVTYGNMLTTMSSENRYTYLDVDGTYTGTPGEIVTDL 980

Query: 957  NPYDYLRYGSYSATDKSTQFLPFRYNQTLFQEDGSYLKLATVTVGYTFKPELTKRLGITS 1016
               + +  G  +    ++  +      +   EDGS+++L  +TVGY+   EL  R+G++ 
Sbjct: 981  GQLEEMNAGK-NIWSHNSYGIAGAVIHSWAIEDGSFIRLNNLTVGYSLPTELISRIGLSQ 1039

Query: 1017 LRVYGTANNIHTFSFYSGADPENVSSLGRDNS--------GGYPVRRTYALGLNI 1063
             R+Y T NN+  ++ Y+G DPE  +S     S          +P  R+Y +G+N+
Sbjct: 1040 FRIYATGNNLKLWTDYTGYDPEVSTSRSSSYSALTPGVDYSSFPRSRSYTVGVNV 1094