Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1094 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  294 bits (752), Expect = 3e-83
 Identities = 286/1132 (25%), Positives = 489/1132 (43%), Gaps = 130/1132 (11%)

Query: 16   LLLLMTLTVLGSS-AWAQ-----NLISVRGKVVDKGDGSGIPAVTIMA---STATRAIGM 66
            L  +M LT++ S  AWAQ     +L  V+GKV DK DGS I   T++    +      G+
Sbjct: 9    LWFVMGLTLITSGYAWAQQQPAQSLEIVKGKVTDKEDGSTIIGATVVEVDRNDERTLRGV 68

Query: 67   TRD-DGTFTVSVPDNATLT-FKYLNYKDVTIKLNGKNDLKIVMVEDLTTLEEVKITV--- 121
              D +G F++ V     L    ++ YK VT+ ++G++++ + +   ++ L+  ++T    
Sbjct: 69   ATDVNGDFSLRVSSKQNLIRVSFIGYKTVTVPIDGRSEINVPLQFQVSDLDVAEVTADKL 128

Query: 122  ---GYGQKTKETVMGAVTSLRGKDIQDVPVSNVAELFQAKVPGLNIQNNTGSPGAAPSIN 178
               G  Q  +  +  + T +  + ++++   ++ +  Q ++ G++I +N+G PGA  SI 
Sbjct: 129  IDQGMMQIDERDLTSSATRVDAELLKEMSALSIDQALQGRMAGVDIVSNSGDPGAGMSIR 188

Query: 179  MRGLSGISVTGSGDNAFLTPTSPLFVIDGVPVDLNTDYQYGFSSNGPGISPLSLIPAEDI 238
            +RG +  S+ GS +        PL V+DG+P   NT      ++N    + L  +   DI
Sbjct: 189  IRGTT--SINGSSE--------PLIVVDGIPFQTNTSSFDFANANEQEYAQLLNVAPADI 238

Query: 239  DEILFLKDASATALYGAQGAYGVILINTRRGKSKTPIIQYSTNFFFNTPPKLRQVIGGAA 298
            + I  L+DA+ATAL+G++G+ GV++I T+RG    P I YS        P    ++ G  
Sbjct: 239  ESITVLRDAAATALWGSRGSNGVLVITTKRGSKGKPTITYSFRGAMTQQPDQIPMLNGDQ 298

Query: 299  ESNLRLWEIYTYGANI---YSARQSVDNTPMLADSLNAFYN--NSTDWQSIFYRSTYNQQ 353
             S L + E Y     +    SA +     P        FYN  N+TDW +   +  Y   
Sbjct: 299  YSTL-IAEGYMNSRGVPLNISANKEFSYDPK---DPYYFYNYGNNTDWINEITQLGYMFD 354

Query: 354  HNVNASGGDDSFNYKINLGYYDEKGIQENTGFTRYSLSMNTRYKPSPKFNVNLILSSSLG 413
            HN+  SGG +   Y++++   +  G    TGF R++  ++  Y  S K  V   L+ +  
Sbjct: 355  HNLALSGGGEKTRYRVSVNKNNSVGTTVGTGFDRFATRVSLDYLVSKKIRVMTDLAYTKS 414

Query: 414  NSQKGSGN---------------------------GILQTGVASGAGS-SSLLPGPNLIN 445
             + +   N                           G L     S A +     PG     
Sbjct: 415  TTDRNWVNDKDGQDRVRGIAYEKMPNMSPYEYDEFGNLTPNYFSPASNIQGAFPG----T 470

Query: 446  SNAALGALIVDNDNKAGNIKTSVEARYEFLTGLAVSNITSYDYSMGTTETFNPAI----- 500
             N    A    N  ++  I      +Y     L   +  ++D +    E+F P +     
Sbjct: 471  YNPLALANEATNRTESDRIIPKFTLQYHIRPDLMFQSDVAFDINNTQRESFLPQVATGLP 530

Query: 501  LNNNVAGVYSYNDKRSTLYNRAMVSFNK-----SLQKDVHNIGAYVFSEVYVRNFQAHAI 555
            +NN    + S +D    +      +FNK      L +D H++ A +    Y      +A+
Sbjct: 531  MNNQNVNMASGSDTDFLITQ----TFNKLYYTPELGED-HSLMAMLLFTTYEGRSDGYAV 585

Query: 556  QQDQYTNDQYQGPFGSASASSGGGVLDNYSDSRAASLAASLSYNYQTKYLIEATFRLDGT 615
                  +   Q P G+ +      +    S SR+  + A++ Y    +Y+I A+ R DG+
Sbjct: 586  GTTNSASSFLQVP-GTVNRDDNVFLSSGTSISRSIGMVANVQYGLLDRYIINASIRRDGS 644

Query: 616  SSTGLNAPWAKNPSLALKWNFNKENFLADSKWLDVGMLRLSWGRNIAPVGNVFDANGTYD 675
            S  G N  W   PS++ +W  + E F+ D  WL+   LR S+G +       +    T+ 
Sbjct: 645  SKFGDNHRWGTFPSVSGRWRVSGEPFMEDFTWLNEFSLRASYGESGNTPRQDYVHFSTFS 704

Query: 676  YYGNYNGIPTTAVDFNNLPNIKLLPTTTTQYNAGLDLNLFKNRITLNFDTYYKMVDNQLW 735
               N+N +  T V  NNL           Q N GL+L + ++R+ + FD Y K   +   
Sbjct: 705  NL-NWNYLGETGVVPNNLELTNFKWENVAQTNLGLNLEILQSRVIVGFDWYQKRTSDLFL 763

Query: 736  EK-NITTHNAFTKLKTNEVSNVNYGYELALSFRPLPASS-KVNWSVSINGAYNKEKITAL 793
            +   I +   F+ +  N  +  N G+EL++   P      K+N+  +I  A NK  I ++
Sbjct: 764  DNLRIPSTTGFSSVNMNIGTMDNRGWELSVFTTPYQKGDLKINFDFNI--ARNKNIIQSI 821

Query: 794  PDATRQLLLDGGATGQAILYRLGRNSLTNILYNF--KGVFSTDDDVPVNPANGTRYHTFN 851
             +  +   L+   +       +   +     Y F  KGV++  +      ANG      N
Sbjct: 822  SELYQTDNLEAMQSNGNYFVTIQEGNPLGSFYGFKYKGVYTDGEATLATDANGNVITGPN 881

Query: 852  GS---------TPVY-FKAGDPYYADINGDYVLDAKDMVGAGNSQPLINGGISSYASYKG 901
            G          T  Y F+ GD  Y DIN D  +D KD+V  G++ P + GG     +YK 
Sbjct: 882  GDPVQMMFTYPTIAYEFQPGDAMYEDINHDGNIDYKDIVWLGDANPKLTGGFGPRVTYKN 941

Query: 902  FSLNVIMAYTWHRDILNNPLAASFQNFSSPFSANNLVPITEYNIWRQSGDIANYPNPYDY 961
              ++    + +  DI+N+    + +N  S  + N  V     N WRQ GD  + P     
Sbjct: 942  LQVSGYFNFRYGVDIVNSTRMLT-ENMYSYDNQNAAV----LNRWRQPGDETDMPRALIG 996

Query: 962  LRYGSYSATDKSTQFLPFRYNQTLFQEDGSYLKLATVTVGYTFKPELTKRLGITSLRVYG 1021
              Y ++  +D+             + EDGS+++  T+TV Y+       R  +  L  Y 
Sbjct: 997  TGY-NWLGSDR-------------YVEDGSFMRFRTLTVRYSMPKPFLDRTKLGDLSFYL 1042

Query: 1022 TANNIHTFSFYSGADPE---------NVSSLGRDNSGGYPVRRTYALGLNIQ 1064
            TA N++T++ Y+G DPE          +  +G DN+   P  +TY LG+N++
Sbjct: 1043 TAENLYTWTNYTGQDPEVGLTSSNANRLFQIGYDNA-RTPPTQTYTLGINVR 1093