Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1056 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  300 bits (767), Expect = 5e-85
 Identities = 284/1080 (26%), Positives = 465/1080 (43%), Gaps = 131/1080 (12%)

Query: 37   VRGKVVDKGDGSGIPAVTIMASTATRAIGMTRDDGTFTVSVPDN-ATLTFKYLNYKDVTI 95
            + G VV   D   +P V+I+     +   +T  DG FT+ VPD  A LTF  + +    I
Sbjct: 55   ISGTVVSSEDNLPLPGVSILLKGTGKGT-VTDIDGNFTLEVPDEGAVLTFSSIGFVTQEI 113

Query: 96   KLNGKNDLKIVMVEDLTTLEEVKITVGYGQKTKETVMGAVTSLRGKDIQDVPVSNVAELF 155
             +  +  L + +  D+  L EV + VGYG + K  + GA+  +  +++ + P+  V +  
Sbjct: 114  AVGSQTTLNVTLQVDMQQLGEV-VVVGYGTQKKANITGAIAQMEPENLTERPIQRVDQAL 172

Query: 156  QAKVPGLNIQNNTGSPGAAPSINMRGLSGISVTGSGDNAFLTPTSPLFVIDGVPVDLNTD 215
              ++ G+ ++  TG PG    I +RG+  I+            + PL+VIDG P++    
Sbjct: 173  VGQMAGVRVKQTTGVPGRGFDIQIRGVGSITAN----------SQPLYVIDGFPLE---- 218

Query: 216  YQYGFSSNGPGISPLSLIPAEDIDEILFLKDASATALYGAQGAYGVILINTRRGKSKTPI 275
                      G +P+  I   DI+ I  LKDA+A A+YG++ A GV++INT+ GKS    
Sbjct: 219  --------AAGGNPMDNISPNDIESIQVLKDAAAAAIYGSRAANGVVMINTKSGKSGKAQ 270

Query: 276  IQYSTNFFFNTPPKLRQV------IGGAAESNLRLWEIYTYGANIYSARQSVDNTPMLAD 329
            I  ++   FN   K   V      I  A E     WE    G    SA QS+     +  
Sbjct: 271  ISLNSYIGFNETVKKLDVLSPTEWIDRATEMINTQWEQSGEGR---SASQSLAEREAIIG 327

Query: 330  SLNAFYNNS-------------TDWQSIFYRSTYNQQHNVNASGGDDSFNYKINLGYYDE 376
              +  Y                 DWQ   +R    Q + +NASGG+++  Y I+  Y D+
Sbjct: 328  GFDRNYMYDERWTMEGYPGLMLVDWQDHLFRKGLVQNYQLNASGGNENVKYFISGDYLDQ 387

Query: 377  KGIQENTGFTRYSLSMNTRYKPSP--KFNVNLILSSSLGNSQKGSGNGIL---------- 424
            +GI     + RYS   N   + S   KF +NL  S S  N     G   +          
Sbjct: 388  EGIAVGLDYKRYSARANVEVQASNKLKFGLNLNPSYSTLNDPGVEGKDAITHTTVGMAPV 447

Query: 425  ---QTGVASGAGSSSLLPGPNLINSNAALGALIVDNDNKAGNIKTSVEARYEFLTGLAVS 481
                 G+ +G G   L    +   S  A     ++      N+ T+   +Y+F+ GLA  
Sbjct: 448  VEADAGLNTGVGEIPLYTWASSRLSPIAYAKSRLNETTIFRNLATAY-GQYDFIDGLAFK 506

Query: 482  NITSYDYSMGTTETFNPAILNNNVAGVYSYNDKRS-TLYNRAMVSFNKSLQKDVHNIGAY 540
               + D      + + PA +  N      +N  R  T  N   +++ KS  ++ HN+ A 
Sbjct: 507  TTLNVDNVDQQNKNYTPAAVTRNNQTTGGFNGYRKLTFVNENTLTYVKSFNEE-HNLNAV 565

Query: 541  VFSEVYVRNFQAHAIQQDQYT---NDQYQG-PFGSASASSGGGVLDNYSDSRAASLAASL 596
            +       NF     +++ YT   N   +G    +A+  + G      + S   S    +
Sbjct: 566  IGMSY---NFN----KRNTYTMGGNFDVEGITTLNAAVINAGSTNTTETQSTLLSYFGRV 618

Query: 597  SYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKENFLADSKWLDVGMLRLS 656
             Y+Y+ KYL+ A+ R DG+S  G    W   PS++L W  + E F+ D  ++    +R S
Sbjct: 619  QYDYKGKYLVSASARRDGSSRFGDETKWGFFPSVSLGWRLSDEAFMQDVPFISDLKVRGS 678

Query: 657  WGRNIAPVGNVFDANGTYDY-------YGNYN--GIPTTAVDFNNLPNIKLLPTTTTQYN 707
            WG +    GN    NG  DY       + NY+  G  +  +   N PN +L    +   N
Sbjct: 679  WGLS----GN----NGIGDYSHIATLDFANYSYGGALSNGLIPGNFPNPELGWEESEMMN 730

Query: 708  AGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAFTKLKTNEVSNVNYGYELALSFR 767
             GLDL + +NR  ++FD Y +   N L    + +   FT   TN    +N G+EL L+ R
Sbjct: 731  VGLDLGILENRFYVSFDYYTRKNTNLLLNIPVPSATGFTTALTNIGEVMNKGWELELTSR 790

Query: 768  PLPASSKVNWSVSINGAYNKEKITAL-PDATRQLLLDGGATGQAILYRLGRNSLTNILYN 826
             +  + +  W+ ++N ++N  ++  L P+ T   +L G       +  +G+   T  L  
Sbjct: 791  NI--TGQFEWTTNVNLSHNNNEVRQLGPNNTP--ILGGSFDINHRITMVGQPMNTLFLVQ 846

Query: 827  FKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGDPYYADINGDYVLDAKDMVGAGNSQ 886
              G+  T +++     NG   +          + GDP Y D N D V+D  D + +GN  
Sbjct: 847  NIGIL-TQEEID----NGAALYGNQ-------EEGDPQYLDANNDGVIDPDDRILSGNPN 894

Query: 887  PLINGGISSYASYKGFSLNVIMAYTWHRDILNNPLAASFQNFSSPFSANNLVPITEYNIW 946
            P    GI++   YKGF LN+++   W   ++ +    +       +  N L      N W
Sbjct: 895  PDYIWGITNNFRYKGFDLNILVQGQW-GGLIYSTFGRAMDRPGMGYVENTLG--RHRNRW 951

Query: 947  RQSGDIANYPNPYDYLRYGSYSATDKS-TQFLPFRYNQTLFQEDGSYLKLATVTVGYTFK 1005
            R         NP D         T K+ + F   +    L+  D  Y ++  +T+GY   
Sbjct: 952  RSP------ENPGD-------GETGKAVSSFGRIKNTDWLYPSD--YWRIRNITLGYDLG 996

Query: 1006 PELTKRLGITSLRVYGTANNIHTFSFYSGA-DPENVSSLGRDNSGGYPVRRTYALGLNIQ 1064
              +     ++  RVY TA N      Y+G  +PE V+S G D+ G +P+ ++   G+N++
Sbjct: 997  RLIANEKLLSGARVYMTAENFFGGDKYTGGFNPEAVNSDG-DDYGAFPLSKSIVFGVNLK 1055