Pairwise Alignments

Query, 1065 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1057 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  309 bits (791), Expect = 8e-88
 Identities = 284/1097 (25%), Positives = 488/1097 (44%), Gaps = 142/1097 (12%)

Query: 36   SVRGKVVDKGDGSGIPAVTIMASTATRAIGMTRDDGTFTVSVPDNATLTFKYLNYKDVTI 95
            +VRG+V D  +G  +   TI+    T    ++ D G F++SVP NATL F Y+ Y    +
Sbjct: 32   TVRGRVTDAIEGEPLIGATIVQKGTTNGT-VSDDSGEFSISVPANATLIFSYIGYLSKEV 90

Query: 96   KLNGKNDLKIVMVEDLTTLEEVKITVGYGQKTKETVMGAVTSLRGKDIQDVPVSNVAELF 155
            ++  +  + + + EDL +LE V + VGYG + K  + GAV ++ GK++  +P  +  ++ 
Sbjct: 91   QIGNQTTVDVALEEDLKSLEGV-VVVGYGTQKKSDLTGAVGTISGKELLSIPSPSFDQMM 149

Query: 156  QAKVPGLNIQNNTGSPGAAPSINMRGLSGISVTGSGDNAFLTPTSPLFVIDGVPV----- 210
            Q K+ G  I   TG+PG   +I +RG+S  S+TG           PL+VIDG  +     
Sbjct: 150  QGKIAGTQITQTTGAPGGNVNIVIRGVS--SITGGNQ--------PLYVIDGFAMGAGGS 199

Query: 211  --DLNTDYQYGFSSNGPG------ISPLSLIPAEDIDEILFLKDASATALYGAQGAYGVI 262
              D+++     FSS G        I+PL+ I   DI+ I  LKDASATA+YG++GA GV+
Sbjct: 200  GSDVSSFNGNSFSSGGMAQNTASKINPLTNINPADIESIEILKDASATAIYGSRGANGVV 259

Query: 263  LINTRRGKSKTPIIQY-STNFFFNTPPKL-----RQVIGGAAESNLRLWEIYTYGANIYS 316
            +I T+RGK     I + ++N       KL     RQ     A+     W +    A+  +
Sbjct: 260  IITTKRGKQGQSKINFDASNGVQMIANKLDMLNARQFAEFVADGRDNAWVLSGGNASDPN 319

Query: 317  ARQSVDNTPMLADSLNAFYNNSTDWQSIFYRSTYNQQHNVNASGGDDSFNYKINLGYYDE 376
              +S                 +T+WQ + +R +  Q + ++ASGG +  +Y ++ GY+++
Sbjct: 320  EVRSAGTRVKPEFRNPEAITVNTNWQDVIFRPSVVQSYQLSASGGKEGVDYYVSGGYFNQ 379

Query: 377  KGIQENTGFTRYSLSMN--TRYKPSPKFNVNLILSSSLGNSQKGSGNGILQTGVASGAGS 434
            +GI + + F +++L  N         K  +++  S S G   +  G+ + Q G+ S A +
Sbjct: 380  EGIIKGSDFKKFNLRSNIDAYLTKRLKLGISIAGSHSWGKFARAEGH-LGQRGLISAALA 438

Query: 435  SSLLPGPNLINSNA--------ALGA------LIVD---NDNKAGNIKTSVEARYEFLTG 477
            SS  P  ++ + N          LG       LI+D   +   + N+ T+    YE + G
Sbjct: 439  SS--PALSVYDKNGNYTSELLDPLGVPVENPLLIIDEFSDTRSSTNVFTNNYLEYEIVEG 496

Query: 478  LAVSNITSYDYSMGTTETFNPAILNN-------NVAGVYSYNDKRSTL--YNRAMVSFNK 528
            L + +    +Y    T  +  + +           AGV+    +R+ L   N  ++++ +
Sbjct: 497  LTLKSSIGINYIADHTRLWKSSEIGEWGAKTSLATAGVH----QRTNLNWLNENVLNYRR 552

Query: 529  SLQKDVHNIGAYVFSEVYVRNFQAHAIQQDQYTNDQYQGPFGSASASSGGGVL--DNY-S 585
            S+   VH++ A V        F A   + D         P       +GG V    NY S
Sbjct: 553  SIN-GVHDVDAIV-------GFTAQKDKTDWLQAGATDFPTDHIEYLAGGNVNAGTNYVS 604

Query: 586  DSRAASLAASLSYNYQTKYLIEATFRLDGTSSTGLNAPWAKNPSLALKWNFNKENFLADS 645
            +    SL A ++Y Y+ KYL+  T R DG+S  G N  W   PS ++ +  ++E F+   
Sbjct: 605  EWSMLSLLARVNYTYKGKYLVTGTVRRDGSSRFGPNNRWGTFPSFSVGYRISEEPFMQSV 664

Query: 646  KWLDVGMLRLSWGRNIAPVGNVFDANGTYDYYGNYNGIPTTAVDFNNLPNIKLLPTT--- 702
             ++D   +R S+G            N     Y +   + TT    +N   + ++P +   
Sbjct: 665  TFIDNLKIRASYG---------VSGNNLIGNYAHIGLLGTTRYVSSNQAALGIIPQSLAN 715

Query: 703  -------TTQYNAGLDLNLFKNRITLNFDTYYKMVDNQLWEKNITTHNAFTKLKTNEVSN 755
                   + Q N GLD+ LF NR+TL+ D Y     + L   ++   + F+    N    
Sbjct: 716  ENLTWERSLQTNIGLDVALFDNRLTLSVDAYKNHKKDLLLNASLPAISGFSASTQNIGEL 775

Query: 756  VNYGYELALSFRPLPASSKVNWSVSINGAYNKEKITALPDATRQLLLDGGATGQAILYRL 815
             N G E  L    +  +   +W+ + N   NK K+  L     ++              +
Sbjct: 776  ENKGLEFTLD-AVVVNTGNFSWNSNFNIGVNKNKVLVLNSDNARI-----ENSAYQFTEV 829

Query: 816  GRNSLTNILYNFKGVFSTDDDVPVNPANGTRYHTFNGSTPVYFKAGDPYYADINGDYVLD 875
            GR   +  + +  GVF   DDV  +P                 + GD  + D+NGD V+ 
Sbjct: 830  GRPISSFYMLHAIGVFQDWDDVDAHPKQHPDV-----------QPGDLKFEDVNGDGVIT 878

Query: 876  AKDMVGAGNSQPLINGGISSYASYKGFSLNVIMAYTWHRDILNNPLAASFQNFSSPFSA- 934
              D    G+  P    G ++   Y  F+L++ +  +   D+        FQ      +A 
Sbjct: 879  NDDKTFVGDPWPDYTFGFNNRLEYDNFALSISVTGSQGNDVY-------FQGGEIILNAA 931

Query: 935  --NNLVPITEYNIWRQSGDIANYPNPYDYLRYGSYSATDKSTQFLPFRYNQTLFQEDGSY 992
               N + +T+   W+   D  N   P   +R         ++++L           DGSY
Sbjct: 932  GVQNQLAVTDER-WKSLDDPGNGFTPRA-IRSDYAKGISSNSRYL----------FDGSY 979

Query: 993  LKLATVTVGYTFKPELTKRLGITSLRVYGTANNIHTFSFYSGADPE------NVSSLGRD 1046
            +++  + + YTF+ +  +++ ++ L VYG  +N++TF+ Y G DPE      N+++ G D
Sbjct: 980  VRIKNINLSYTFQRQTLEKINLSGLSVYGDISNVYTFTDYPGYDPEASSTGDNIAASGID 1039

Query: 1047 NSGGYPVRRTYALGLNI 1063
                YP+ R + LGL +
Sbjct: 1040 YF-SYPIPRIFTLGLRV 1055