Pairwise Alignments

Query, 157 a.a., RNA polymerase sigma-70 factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 187 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 68.9 bits (167), Expect = 4e-17
 Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 11/156 (7%)

Query: 11  FAVCYNNIKEVEPAKGMVQEIFKSLWERRSELEI-EKIEHYLIRSAKFKTFEYIRN-KVN 68
           FA  Y  I ++  A+ +V +     WE R +++  E I  YL+ + K K   Y+R  + +
Sbjct: 26  FAQTY--IPDISIAEDIVMDTLAYYWEHRRDIKNDENILSYLLTAIKHKCLNYLRQERFH 83

Query: 69  RQKHNEFQMM-------DCSVSSNCTEEQVLFNNLKEKVDVLVDTLPCQCKRVYKMSREQ 121
            +K+N    +         S  S C   ++  N ++E V+  ++ LP + ++++ M+R +
Sbjct: 84  YEKNNSLSELALWELDFKISALSACDPCELYTNEVQEIVNHTLEKLPSKTRQIFFMNRYE 143

Query: 122 GMSNKEIAGLLYISERAVEYHITKAMSRLKVGLASY 157
            +S  EIA  L+++++ VEYHI+KA+  L+  L  Y
Sbjct: 144 DISYPEIAKKLFVNQKTVEYHISKALKALRAVLKDY 179