Pairwise Alignments

Query, 157 a.a., RNA polymerase sigma-70 factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 191 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 23/168 (13%)

Query: 7   WEKVFAVCY-------NNIKEVEPAKGMVQEIFKSLWERRSELEI-EKIEHYLIRSAKFK 58
           ++ VF  CY         +   E A+ +VQ++F  LW RR  + I E+I  +L RS   K
Sbjct: 9   YKAVFRQCYPKLLFYATRLVGTEEAEDVVQDVFVELWRRRDSVVIGEQILAFLYRSVYTK 68

Query: 59  TFEYIRNKVNRQKHN-----------EFQMMDCSVSSNCTEEQVLFNNLKEKVDVLVDTL 107
               ++++V    ++           ++   D +      E Q     L++++   ++ L
Sbjct: 69  AINLLKHQVIENNYSAAMIEIYERKLQYYQPDHAEVIKKIENQ----ELRQEIFEAINEL 124

Query: 108 PCQCKRVYKMSREQGMSNKEIAGLLYISERAVEYHITKAMSRLKVGLA 155
           P +CK V+K+S    M NKEIA  L IS R VE H+ KA+  L+  L+
Sbjct: 125 PDKCKEVFKLSYLHDMKNKEIADTLGISLRTVEAHMYKALKFLRERLS 172