Pairwise Alignments

Query, 157 a.a., RNA polymerase sigma-70 factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 200 a.a., RNA polymerase sigma-70 factor from Phocaeicola dorei CL03T12C01

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 39/156 (25%), Positives = 84/156 (53%), Gaps = 1/156 (0%)

Query: 3   YELYWEKVFAVCYNNIKEVEPAKGMVQEIFKSLWERRSELEIEK-IEHYLIRSAKFKTFE 61
           +  Y  +V   C + +K+ E A+ + Q+IF ++WE++ ++ IE+    +L   A+ + ++
Sbjct: 27  FSFYKSQVLYYCVHFVKDKEIAEDITQDIFLTVWEKKEDIRIEQSFSAFLYTIARNRIYD 86

Query: 62  YIRNKVNRQKHNEFQMMDCSVSSNCTEEQVLFNNLKEKVDVLVDTLPCQCKRVYKMSREQ 121
             R+   R    E  M       +  E+ +   N++E +   ++ L  + + ++++SR +
Sbjct: 87  IFRSLSARSVLYEKLMEQAIDYVDDVEKSLEEKNIQELIAQALEQLSPRQREIFELSRNR 146

Query: 122 GMSNKEIAGLLYISERAVEYHITKAMSRLKVGLASY 157
           G+S+KEIA  L +S   V+ HI  A+ +++V L  +
Sbjct: 147 GLSHKEIAEQLGLSVYTVQDHIKNALEKIRVYLIPF 182