Pairwise Alignments

Query, 316 a.a., transcription antitermination factor NusB from Pedobacter sp. GW460-11-11-14-LB5

Subject, 166 a.a., transcription antitermination protein from Pseudomonas putida KT2440

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 18/62 (29%), Positives = 38/62 (61%)

Query: 241 ERIALMDTILMKMAICELLNFPSIPVKVTINEYLELSKDYSTPKSNSFINGILDKILGDL 300
           E +  ++  +++++  EL+    +P +V INE +EL+K +     + F+NG+LDK+   L
Sbjct: 97  EELDPVELAVLRLSTWELIKRVDVPYRVVINEGVELAKVFGATDGHKFVNGVLDKLAPAL 156

Query: 301 KK 302
           ++
Sbjct: 157 RE 158



 Score = 22.7 bits (47), Expect = 0.006
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 4  RRHLRIKALQNIFAWHMA 21
          RR  R  A Q ++ WHMA
Sbjct: 28 RREARKLATQALYQWHMA 45