Pairwise Alignments

Query, 1179 a.a., chromosome segregation protein SMC from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1149 a.a., Chromosome partition protein Smc from Acinetobacter radioresistens SK82

 Score =  406 bits (1044), Expect = e-117
 Identities = 325/1213 (26%), Positives = 588/1213 (48%), Gaps = 111/1213 (9%)

Query: 1    MQLTRLEIKGFKSFGDKVTINFNEGVTAIVGPNGCGKSNVIDAMRWVLGEQSTKALRSEK 60
            M+L+ L++ GFKSF D  T+NF +  +A+VGPNGCGKSNVIDA+RWV+GE S + LR   
Sbjct: 1    MRLSSLKLSGFKSFADSTTLNFRDSRSAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGS 60

Query: 61   MENIIFNGTKNRKQAQLAEVSLSFDNTKNILP---TAYSQVTVTRKLYRNGDSEYRLNDV 117
            M+++IF GT  RK   +A V L FDNT   L     AY+++ V R++ R G SEY LN  
Sbjct: 61   MQDVIFTGTAKRKPVGMASVELRFDNTYGKLGGAYNAYNELAVRRQVNREGKSEYFLNGT 120

Query: 118  QCRLKDITDLFLDTGIGSDSYSIIELKMVDEIITNKEHSRRSLFEEASGISKYKLRKRQT 177
            +CR +DITD+FL TG+G  SY+IIE  M++ ++  K    R   EEA+GIS+Y+ R+R+T
Sbjct: 121  RCRRRDITDIFLGTGLGPRSYAIIEQGMINRLVDAKPDEMRVFIEEAAGISRYQARRRET 180

Query: 178  FSKLKDTEADLERVEDLLFEIEKNLKTLENQARKAERYYKLKEQYRELSVQLATHRIAFF 237
               L+ T  +L R+ED+  E++  LK+L+ QA  A +Y +L+ + R L +++ +      
Sbjct: 181  LLHLEHTTQNLSRLEDIALELKSQLKSLKKQAETAVQYKELENRIRTLKIEILS-----V 235

Query: 238  RTDLNALETQEQNQQVNRTELSNKIDTGEAELQKLKLGSISQEKNLSVQQKATNEFV-SK 296
            + + +    QE   Q+N    S K+   E    +  L S S+     +QQ A  +    +
Sbjct: 236  QCERSQHLQQEYTLQMNELGESFKLVRSELHTLEHNLTSTSELFQRLLQQSAPLQSEWQQ 295

Query: 297  IRAYESEKKVKNEQMRFLQEKETRLSGELEKDKNQVNH----IKYNIKRLNEEVLTETEV 352
                 +E K+  EQ + L ++ T +  +LE+ K Q       I+  ++ L ++     E 
Sbjct: 296  AEKKMAELKMTLEQKQSLFQQNTTMLNQLEQQKVQTKERLKLIELQLENLYQQQEQLDEQ 355

Query: 353  FNRLESDLKLLKSTLDTLREQQQTEKNRIDNLIKSVNELQNNVYQSQKEIDILNIQKDAL 412
              + E   +     +  L+ QQQ    + + L + V +      Q Q+++ +L  Q + L
Sbjct: 356  TQQQEQQHQGRTQDIQLLKAQQQQVGQQFEQLKQQVEK------QQQQKMQML-AQTEQL 408

Query: 413  VQETNRNVDDTETKTLELKAFDHALAELDIQVREKQANIKNLTEAEEILKEKLAASEINL 472
            ++   R     ET   ++          +++ R         TE ++ L++++   E+ +
Sbjct: 409  LKNIGRIEQQRETLHTQIAQLQQQYESDELEQRH--------TEKQQ-LQQQIEVLELQI 459

Query: 473  SSNKEKLTAENRKKDAKQNEYNLTKSLVDSLEGFPESIRFL--KKNNAFAKSALLLSDIL 530
            ++ K+K+         K ++    KS +  L    ++++ L  +      K  + L  IL
Sbjct: 460  NTRKQKIIGLESVYTQKSSKLGELKSSIQILYSEQKNLKQLMTQYGPVIQKDQVQLVQIL 519

Query: 531  FCNED---YRIAIENYLEPVMNHYVVDQYADAVQAINLLTDASRGRANFFI-LENVPD-K 585
              N+    Y   IE +L   +  +V++      + I   +   +G ++  I L+++P   
Sbjct: 520  KLNKQAKPYASLIEKFLSKWLTAHVLETGQSFSENI---SRQLKGHSDELIQLDHLPCLA 576

Query: 586  NPVIGTHEGLVSALSVIEVDKKYQHLCNLLLQNVYIAVAEQENLFKVTPTESLTILAKNG 645
            N +   H  L + ++V             L + +Y+         K       +IL  +G
Sbjct: 577  NWIETPHYSLWTQVAV----------ATTLSEALYL---------KDKLHTGQSILTLDG 617

Query: 646  KYAQTKFTLAGGSVGLFEGKRIGRAKNLENLAKEIKASESLINQYNAAIKAETDQIFELK 705
             +    + +A     L+        + + +    ++  E+L+ Q    ++ +  Q+  +K
Sbjct: 618  YHVGADWAIA-----LYYDDDSQAGQGMLSHRIRLEEIEALLMQSGEQLEQQEAQLLTVK 672

Query: 706  EASKIN------QINALQQEMNRLNNEHISVQTRRDQYQEFITTSENRKTDIAQKIVSIE 759
            +  +        Q++ L+Q+   L    IS+   +   Q      +     + Q  + ++
Sbjct: 673  QQVQTEQHQQQLQLDLLKQQQTVLQQLDISIAKIQSTAQALKLQQQQLHIQLQQFDLQLQ 732

Query: 760  KALSEKLPALVQLQK---DQQEAHVNLQEQQLNYQEIADQVNESAGKYNQDNIRFHQQQN 816
            +   +K    + L       ++   N + QQ  ++E+ +Q+        Q N++  QQ+ 
Sbjct: 733  EDAMQKDDLEIDLHALDLKLEQILPNYKAQQFQFEELTEQLESM-----QQNLQHAQQE- 786

Query: 817  KLSGLEKDLDYRFVQEEALNKRIAQNDKELQEALTQITATLQHTD---LNDDTLLEMYQQ 873
             L  + +       Q E L K  +    + Q+ +TQI  + +  D   L    L   + Q
Sbjct: 787  -LDLIRRQAMQTKQQIELLEKDASFLKVQYQQIITQIEQSKKFVDPIQLELPNLESQFSQ 845

Query: 874  REEMEKGLAEAEQAYFTSKGSINEVENDLTNIR-KNREETDFLLTEIKDKKNALKIDLNA 932
            ++++ + L ++   +      + E +  LT  R + +++ + L TE+++K+ A +    A
Sbjct: 846  QQQLTENLEKSWHKWQVELNQVQEKQQQLTEQRYRFQQQDESLRTELEEKRLAWQ----A 901

Query: 933  LKERLAVEFNIDINDLLETDTEIEALESE------FDL---RQKVERMKRQLDEFGAINS 983
             K           +D L    +++ L SE       DL   +Q++E+++++ ++ GA+N 
Sbjct: 902  AK-----------SDFLHYTEQLKELNSEPVLGLKIDLSGHQQQLEKIQQKFEKIGAVNL 950

Query: 984  MAMEAFKEMEERYTFIQNQKKDLNAAKTDLLQTIKEIDDTAKDKFMQAFTQAREHFIVVF 1043
             A + + E+ +R+  + +Q +DL      L   +K ID   +  FM  F Q      V+F
Sbjct: 951  AASQEYDEVSQRFEELSHQMRDLENTVEQLKNAMKSIDQETRKLFMSTFDQVNAELQVLF 1010

Query: 1044 RSLFNEEDSCDLILSDINNPLEADIDIIARPKGKRPLSINQLSGGEKTLTATALLFSLYL 1103
              +FN  ++  L L D     ++ I ++ARP GKR  S+  LSGGEK LTA AL+F+++ 
Sbjct: 1011 PKVFNGGEA-SLSLED---DWQSGIKLMARPPGKRNSSLALLSGGEKALTALALVFAIFR 1066

Query: 1104 LKPAPFCIFDEVDAPLDDTNIDKFNNIIRKFSDQSQFIIVSHNKRTIASTDIIYGVTMVE 1163
            L PAPFC+ DEVDAPLDD N+ +F N++++ S+Q QFI ++HNK  +     + GVTM E
Sbjct: 1067 LNPAPFCVLDEVDAPLDDANVQRFCNLVKELSEQVQFIYITHNKIAMTMATDLLGVTMPE 1126

Query: 1164 QGVSRVVAVDLRE 1176
             G S++V V+L +
Sbjct: 1127 PGTSKLVTVNLEQ 1139