Pairwise Alignments

Query, 1123 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1017 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  511 bits (1315), Expect = e-148
 Identities = 331/1028 (32%), Positives = 521/1028 (50%), Gaps = 61/1028 (5%)

Query: 121  QKLDIKGTVTDETGTGIPGASIVNESSKKAVSSDDTGRFSIVAFPGDKIKV-RMVGYEDY 179
            Q   + G V D  G  +PG ++V +   K   +++ G +++     D   V   +G ++ 
Sbjct: 23   QLSQLSGKVVDGLGDPLPGVAVVVKGGTKHAITNEQGVYTLSEVSADATLVFTYLGMKNQ 82

Query: 180  NFTIGNQTTYSISLKPSTVGLNDVVIVGYGTQRKANVTGAISQVDAKVLADRPITAVSTG 239
               +GN++   + L+  +  L +VV +GYG  +K ++TGAI+ +D +V + R  T ++  
Sbjct: 83   EVKVGNRSAIDVVLESESFALGEVVAIGYGVAKKKDITGAIATLDGEVASKRNTTQLAQA 142

Query: 240  LQGTITGLTTIGGSGQPGATHSALRIRGTGTTNNPNPFVLIDGVP-GDMNWINPDDIESV 298
            LQGT+ G+     + +PGA+ + +R+RG  T  + +P V++DGVP   MN +N  DIE +
Sbjct: 143  LQGTLPGVMITRSNSEPGAS-ATVRVRGVTTIGDSDPLVIVDGVPVSSMNDVNAADIEDI 201

Query: 299  TVLKDAASSSIYGSRAANGVILVTTKKGKFNQKAIISYNGYYGFQTPTRLPKMLGSVDYM 358
            +VLKDAAS+SIYG+RAA GV+L+TTK+ K N K  + Y   +GF  PT  PK +G   Y+
Sbjct: 202  SVLKDAASASIYGARAAAGVVLITTKRAKSN-KTNLEYRATFGFDRPTAFPKTVGPQRYL 260

Query: 359  TLLGEAQINAGLPKS------YTDAQIE--VARNGSDPNYFANTNWTDALIKDYAPQQNH 410
             ++ E   N    K       Y    +E  +A N  +PN +  T+W   ++ DYAP+ +H
Sbjct: 261  EMINEFTWNDAGNKPGEEYSLYPKEDVENWLAYNKENPNQYPVTDWMGLVVNDYAPRSSH 320

Query: 411  SINVQGGSSDFNYYFSYGRENQDGLIAGDQYKFAKNNARVKLSALKLLSLLDVDVNLGYL 470
            S+   GGS       S   EN D L   D   F +  AR+  ++++    L  +V+  Y 
Sbjct: 321  SLTFSGGSGKIKSLASLNYENVDALY--DHKSFERVMARIN-NSIEFSDQLKANVDFSYN 377

Query: 471  DRNQNQPAADTEGGGGAIYTAFTSSPLTPVRFTTGTWGYGGGSSNPLAIATDGGFNNFFS 530
               + +P  +       I+ A     +   +++ G    G    N  A    GGF N F 
Sbjct: 378  YNLKKEPVVNP------IWDAQRYPAVFAAQWSDGRIAEGQNGGNVYAALHHGGFENTFI 431

Query: 531  KEFTSNITGTLHVLKGLDIKSQYGLIASSQKRRTFNRRIDYF---NPATNAIIYTTSPNN 587
             +    ++     ++ L           + K + F ++I Y+   +P   A   +     
Sbjct: 432  NKINGRVSLEYEPIENLTFTGVVSPHFYTTKGKLFRKQIPYYTAEDPTLQAGYISGYTAT 491

Query: 588  SLREVATTTTLQNFSMQADYTLNLGEHHIKLLGGYQQETYRFD-AFTAAKTNLVSDDVPV 646
            SL E           + A+YT +  +H   +L GY+ + Y FD    A   N    + P 
Sbjct: 492  SLYEARKDGKTFTKQLLANYTKSFSDHSFNMLAGYE-DFYSFDEVLNAQAENYTLSNFPY 550

Query: 647  LNIGSLNPTA-TGDAYQYALQSLFSRVNYDYAGKYLVEFNMRYDGSSRYAPGKKWGVFPS 705
            L++G L+    TG A++ A +S F R+ YDY GKYL++ N+RYDGSSR  P  +WG FPS
Sbjct: 551  LDLGPLDYMKNTGSAWETAYRSYFGRLLYDYKGKYLLQANIRYDGSSRLHPDYRWGAFPS 610

Query: 706  VSAGWRFSEESFIKDNSRDWFSDGKIRASYGSLGNQYGADGPAYSEWYPYIKVLTSVGTM 765
            VSAGW  SEESF+ +NS    S  K+R S+G LGN+   + P Y     Y   L   G  
Sbjct: 611  VSAGWVISEESFMPENS--VLSFLKLRGSWGQLGNERIGNYP-YQASIGYSNALFYRGGT 667

Query: 766  PIGNILTTGFAQTILSNPLLRWEKATMLNVGLDLAFFNNRLTFTGDIFNKKTVDIQLKVP 825
             +       +A  I     + WE    +++G D  FFNNRL  TGD +NK+T D+ L++ 
Sbjct: 668  IVSATTAAQYAYAIQD---ITWETTETVDLGFDAYFFNNRLMLTGDYYNKRTKDMLLELE 724

Query: 826  QPDVIGLTVPDQNAGAISNKGYELSLGWNDKIGNFKYGITGQFFDIKNTVTDLGGVPPTI 885
             PD +G   P QN G +S KG++  + W D IG   Y  +    D K+ + DLGG+    
Sbjct: 725  IPDYMGFENPQQNTGVMSTKGWDAQITWRDNIGELGYSASFNLSDSKSKMGDLGGI-VLD 783

Query: 886  GDRIRQVGQPLDAFYGYRTDGLAQEADFTKDAAGKYVPKFPIFAADAGKVAPGDLKYRDL 945
            G ++ + G   + +YGY +DGL Q  +  +++   Y             V PGD++Y D+
Sbjct: 784  GAQVTREGSEFNEWYGYISDGLYQSEEEVENSPKLY-----------NSVKPGDVRYVDI 832

Query: 946  NG-----DGLISADLDREVIGDAYPRYNYSFRLDAAYHNFDLSVFLQGVGMANGYITGVG 1000
            +G     DG I+ D DR ++  + PRY Y   + A Y  FDLS+  QGVG     +T   
Sbjct: 833  SGPDGEPDGKITPDYDRVLLSGSLPRYLYGGNVSANYKGFDLSLAFQGVGKQKSRLTEQM 892

Query: 1001 LHA-YNADAAFPQEVHMDRWTPQNT-----GGSYPRFVYKDTRNTGR-LADYWLQDAAYL 1053
            +   ++A    P  +  + W+  NT        YPR  Y  + N    ++DYWL + AY 
Sbjct: 893  VKPFFSAWTNPPAIIDGNYWSHYNTSEENLSARYPRLSYTGSENNNYVMSDYWLINGAYF 952

Query: 1054 RVKNLQLGYTIPGNFLQKIHIDRLRVYASADNLFTDTNFFYAYDPESQATSGGLYPQVKT 1113
            R+KN+ LGYT+P  F  ++ ++++R++ASA +LF+ +++   +DPE    S   Y   +T
Sbjct: 953  RLKNVVLGYTLPTAFTSRVKMEQVRIFASATDLFSVSDYPKGWDPE---VSYNTYIS-QT 1008

Query: 1114 FIFGLSIK 1121
            F  GLS+K
Sbjct: 1009 FNLGLSVK 1016