Pairwise Alignments

Query, 1123 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1163 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  513 bits (1320), Expect = e-149
 Identities = 386/1198 (32%), Positives = 580/1198 (48%), Gaps = 129/1198 (10%)

Query: 18   LKVMRLTIAVLLIFCVQVRASLYAQKINFSLKGASLKEIFQEIKKQSGYDFLYNNEMIGE 77
            L   RL +  LL+  +Q  A  ++Q I+   + ASL+++F+ I KQSGY FLYN+E++ +
Sbjct: 2    LPARRLVVFALLVTYLQAHAYGFSQGISIHEQNASLEKVFKAISKQSGYLFLYNDELLEK 61

Query: 78   AGTFNVTVKDMTIQQVMDKSLENLPLSYAIEQHTIVITKKALPQKLD---IKGTVTDETG 134
            A    + +KD +++ V+    +N PL+Y++ ++TIV+      Q+ +   + G VTD+ G
Sbjct: 62   ARPVTLELKDASLEHVLAVCFKNQPLTYSLVENTIVVKPAPARQRQEEVAVSGKVTDKDG 121

Query: 135  TGIPGASIVNESSKKAVSSDDTGRFSIVAFPGDK--IKVRMVGYEDYNFTIGNQTTYSIS 192
             G+PG ++V + + K  S+D  G FSI   PG    +    +G++        +   +++
Sbjct: 122  VGLPGVTVVLKGTSKGTSTDAEGNFSI-GVPGGAGTLVFSYIGFQAQEVETNGRAIINVT 180

Query: 193  LKPSTVGLNDVVIVGYGTQRKANVTGAISQVDAKVLADRPITAVSTGLQGTITGLTTIGG 252
            L   T  L +VV+VGYGTQ+KAN+TGA+ QV+A+ +A RP   +++ LQG + GL     
Sbjct: 181  LAEDTKALEEVVVVGYGTQKKANLTGAVDQVNAEDIALRPSADITSSLQGLLPGLNIQMN 240

Query: 253  SGQPGATHSALRIRGTGTTNNPNPFVLIDGVPGDMNWINPDDIESVTVLKDAASSSIYGS 312
            SG P AT   + IRG  + N     VLIDG+ G++  +NP DIESVTVLKDAAS++IYG+
Sbjct: 241  SGDPTATPD-INIRGFNSINGGGLLVLIDGIEGNLTRVNPQDIESVTVLKDAASAAIYGA 299

Query: 313  RAANGVILVTTKKGKFNQKAIISYNGYYGFQTPTRL------PKMLGSVDYMTLLGEAQI 366
            R A GVIL+TTK GK  +  +++Y   +G+ TPT        P + G      L G    
Sbjct: 300  RGAFGVILITTKTGKAGEM-VVNYTNNFGWTTPTTRTDYISDPYVYGKTVDAALFG---Y 355

Query: 367  NAGLPKSYTDAQIEVAR---NGS-------DPN----YFANTNWTDALIKDYAPQQNHSI 412
            N      Y +   E  R   NG         PN    +F  TNW D L K Y     H+I
Sbjct: 356  NGTSYTGYNELDWEAIRMVANGEIEPFHELQPNGTYKFFYKTNWYDYLFKKYQYSNMHNI 415

Query: 413  NVQGGSSDFNYYFS---YGRENQDGLI-AG-DQYKFAKNNARVKLSALKLLSLLDVDVNL 467
            +V GGS     Y S   + RE  + +  AG D+Y    N   V     K L L D   N+
Sbjct: 416  SVSGGSDKIKGYLSGRVFERETINNIADAGMDRYNLKAN---VSFKPTKWLELSD---NI 469

Query: 468  GYLDRNQNQPAADTEGGGGAIYTAFTSSPLTPVRFTT------GTWGYGGGSSNPLAIAT 521
             + + ++ +       G G I++  T   L P             +G GG    P A+  
Sbjct: 470  LF-NHDKEEDFGGYRNGYGGIWSTTTWYQLFPFLPNKVDGKPFDLYGQGG----PAAMED 524

Query: 522  DGGFNNFFSKEFTSNITGTLHVLKGLDIKSQYGLIASSQKRRTFNRRIDYFNPATNAIIY 581
               +  F ++EFT+        L+ L++   Y    ++  R       +Y   A   +  
Sbjct: 525  AQNWQRFNTEEFTNTFRARATPLENLELNFNYSNRITNTARTYRLNEFEYLTGARMDL-- 582

Query: 582  TTSPNNSLREVATTTTLQNFSMQADYTLNLG-EHHIKLLGGYQQETYRFDAFTAAKTNLV 640
             T   N L E          +    Y+LNLG +++IK++ G+ QE +  D   A +  L+
Sbjct: 583  QTVGVNRLSEYRWRDYYNALNAYGTYSLNLGAKNNIKVMAGFNQEEFERDRVLAQQGGLL 642

Query: 641  SDDVPVLNIGSLNPTATGDAYQYALQSLFSRVNYDYAGKYLVEFNMRYDGSSRYAPGKKW 700
              D+  L +G+   TA G +  +A+Q  F R NYDY  +YL+E N RYDGSSR+    +W
Sbjct: 643  IRDLANLALGTELMTADGSSELWAVQGYFGRFNYDYDARYLLEVNARYDGSSRFPSESRW 702

Query: 701  GVFPSVSAGWRFSEESFIKDNSRDWFSDGKIRASYGSLGNQYGADGPAYSEWYPYIKVLT 760
            G FPSVS GW+ + ESF +    + FS  K+RASYGSLGNQ              I   T
Sbjct: 703  GWFPSVSVGWQVNRESFWQP-IENTFSFLKLRASYGSLGNQ-------------NISTNT 748

Query: 761  SVGTMPIGNILTTGFAQTIL----SNPL---LRWEKATMLNVGLDLAFFNNRLTFTGDIF 813
               TM IG        Q I+      PL   + WE  + +N G D+ FF NRLT + D++
Sbjct: 749  FQQTMSIGRSEWLDGGQQIIYAGAPAPLPKVVSWETTSTINFGADMGFFRNRLTASIDVY 808

Query: 814  NKKTVDIQLK-VPQPDVIGLTVPDQNAGAISNKGYELSLGWNDK---IGN-FKYGITGQF 868
             K T D+ L   P P V G T P +N  ++ N+G++LSLG+N+    +G+      T   
Sbjct: 809  QKDTEDMYLPGTPLPGVFGATEPKENLASLRNRGFDLSLGYNNSFEVVGSPLAVRATASV 868

Query: 869  FDIKNTVTDLGGVPPTIGDRIRQVGQPLDAFYGYRTDG--------LAQEADFTKDAAG- 919
             + K T+T        +       GQ L   +GY  DG        +A +  F   +   
Sbjct: 869  TNFKGTITKFDNPNGLMSSYWE--GQELGQIWGYHVDGQFQSDEEAIAYQNSFVNPSNSL 926

Query: 920  ----KYVPKFPIFAADAGKVAPGDLKYRDLNGDGLISADL-------DREVIGDAYPRYN 968
                 Y+    +   D  ++  GD+KY D++GDG I           D + IG+A P++ 
Sbjct: 927  GNVYNYILNV-VQNNDWNQLRAGDIKYVDVDGDGRIDRGNYTLEDHGDLQPIGNAMPKFP 985

Query: 969  YSFRLDAAYHNFDLSVFLQGVGMANGYITG---VGLHAYNADAAFPQEVHMDRWTPQNTG 1025
            + F + A++   DLSV   GV   N Y TG    G +     +   +++  + WTP+  G
Sbjct: 986  FGFNVSASWKGLDLSVAGAGVAKQNWYPTGDIYWGTYQRPYLSFLRKDLVDNAWTPETPG 1045

Query: 1026 GSYPRF-----VYKDTRNTGRLADYWLQDAAYLRVKNLQLGYTIPGNFLQKIHIDRLRVY 1080
              YP+           R+   + DY+L++  YLRVKNL LGYT+P     +  I +LRVY
Sbjct: 1046 NRYPQIERGYAALNSGRSLNEMNDYYLENIGYLRVKNLTLGYTLPEALTSRASIKKLRVY 1105

Query: 1081 ASADNLFT--DTNFFYAYDPESQATSGGL--------------YPQVKTFIFGLSIKL 1122
             S +NLFT    N     DPE   ++                 YP  KT+  G+++ L
Sbjct: 1106 LSGENLFTWRFGNLTKYIDPEQAGSAIDYSNPGDAVNRADLRSYPMGKTYSMGINVTL 1163