Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 579 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  198 bits (503), Expect = 6e-55
 Identities = 179/607 (29%), Positives = 263/607 (43%), Gaps = 111/607 (18%)

Query: 32  LASCKKGFLDREPLDSVTDIS-FWKTEEQLKLAANACYSNLRNNNTIAMENMGDNTIYPP 90
           L  C   FL+  P   + +   FW  E  ++  +N  Y  + + + I  +   DN+ +  
Sbjct: 14  LMGCNNDFLELTPGTELGETEDFWNNESSVETYSNGFYGYI-DRDLITEDFSSDNSEHIG 72

Query: 91  NSEYQAISAGNYDFTSGTLNSEWVNLYAAIRRCNHFLENYTKAT---NISATALAQYAGE 147
           N    AI  G Y   +   +  W   +  +R  N+F+EN + A    N+ + +LA     
Sbjct: 73  NPP--AIRRGIYSIPTSLGSGGWS--WGQLRDINYFIENVSHADLEGNVKSRSLAL---- 124

Query: 148 VRFLRAFMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAAAGLPT 207
            RF RA+ Y   +  FGDVP   K LD  DE+++ PR+ R  V++ V  DLD A A LP 
Sbjct: 125 ARFFRAWFYYDKVRQFGDVPWYGKVLDTNDEDLYKPRDSRILVMDSVRKDLDYAIAHLPA 184

Query: 208 AYTAADLGRITKGAAFAWKARVALFFEKW----------------SIAEAAAKSVMDLNV 251
                   RI+K  A A K+R+ L+   W                  A  A++S+MD  +
Sbjct: 185 ETFK---NRISKWTALALKSRICLYEGTWRKYHTEAALSESDEFLEEAAEASRSIMDAAI 241

Query: 252 YQLYTAGGTAKCYNDLFTYKGKLAGGANKETILARPNVAGVSVHNTSREIQVPDQTSRYS 311
           Y L+  G     Y +LF  K        +E ILAR +      +     +        + 
Sbjct: 242 YSLFQTGNADTDYFELFQPKD----AHTEEVILARSSDTQTFYYTP---LFTSTSNGNFG 294

Query: 312 PTKSLVDAYLCIDGLPIDKSPLYSES----TYADIFKNRDPRMNQTILTPGGAW-GGQDD 366
            T+ LV  YL  DG    ++   ++     +Y + F+NRDPR++QT+++PG    G + +
Sbjct: 295 ATRDLVGTYLMKDGRTFQQAYPQAQKRDTMSYFNEFRNRDPRLSQTLVSPGYVRVGTEKE 354

Query: 367 GDADATTNPIFNTPKWNADKKGCITGTGFYFSKYVEVAAVGTVSQDSN----DIHHIRYA 422
             +D + N               +TG       Y+    VG   +D      D+   RYA
Sbjct: 355 AVSDFSQN---------------VTG-------YMVHKRVGPPIEDQGGGYRDVIIFRYA 392

Query: 423 EVLLTFAEARLEQGTLTQTDIDNTINKLRDRVGMKRMVITELAAAGLD---------LRT 473
           EVLL +AEA+ E G L Q  ID TIN +R+RVGM  + +       LD         L  
Sbjct: 393 EVLLNYAEAKAELGELGQQGIDQTINPIRERVGMPHLSLPVEVDGFLDRMYDHTSDPLVL 452

Query: 474 EIRRERRVELALEGQRYYDILRWKQGDLLAQD-----VKGMKKSL--------------- 513
           EIRRERRVELA EG R  D+ RWK+G L  +      VKG+++ +               
Sbjct: 453 EIRRERRVELAFEGFRTDDLKRWKEGHLFREKYEGIYVKGLEEYIDLNGDGNPNLYVLEY 512

Query: 514 -----------VESFNQQYVATIATDANGYFV-VNTGRKFVAPKNYLWPIPITQLQRNPV 561
                      V+ F    +  ++ D  G  V  N          YL PIP  +L  NP 
Sbjct: 513 DETPPADQIEGVQYFRMSEIHGLSEDNQGRIVPYNAILPGFEDHEYLKPIPTEELTLNPE 572

Query: 562 LGQNPGW 568
           L QNPGW
Sbjct: 573 LEQNPGW 579