Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 575 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  349 bits (895), Expect = e-100
 Identities = 220/575 (38%), Positives = 308/575 (53%), Gaps = 41/575 (7%)

Query: 26  LIPSFFLASCKKGFLDREPLDSVTDISFWKTEEQLKLAANACYSNLRNNNTIAMENMGDN 85
           ++  F  ++C   FLD+ PLDSVT  ++W+TE QL+ A   CY  L     I     G +
Sbjct: 9   ILALFLFSACDDEFLDKYPLDSVTHETYWETESQLRAALYPCYEGLDYELLIYPNVFGGD 68

Query: 86  TIYPP-NSEYQAISAGNYDFTSG-TLNSEWVNLYAAIRRCNHFLENYTKATNISATALAQ 143
            ++   NS    I  G +    G    S W  LYA I  CN+FL++Y KA N+       
Sbjct: 69  VVWGDLNSGLAKIPGGRHTALDGFPFTSFWSWLYAPIFTCNNFLDHYDKA-NVDQDTKDV 127

Query: 144 YAGEVRFLRAFMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAAA 203
           YA EV+ +RA  Y +L   +GDVPL+ K ++    E + PR  R EV++F+  DLD AA+
Sbjct: 128 YAAEVKVIRALQYFWLTSYWGDVPLVDKVINAS--EAYMPRTPREEVVQFIMDDLDWAAS 185

Query: 204 GLPTAYTAAD-LGRITKGAAFAWKARVALFFEKWSIAEAAAKSVMDLNVYQLYTAGGTAK 262
            L     + D +GRI +  A A KARVAL  E W +A   AK +MD + Y LY+      
Sbjct: 186 KLGEEIPSGDDVGRINRWGALAVKARVALQNEMWEVAANTAKEIMDNSPYALYSN----- 240

Query: 263 CYNDLFTYKGKL-AGGANKETILARPNVAGVSVHNTSREIQVPDQTSRYSPTKSLVDAYL 321
            Y D++   G      AN+E I+    V  +  +N S     P    R + +K LVDA+L
Sbjct: 241 -YGDMYKLAGNAETNPANREAIIYSLFVEDLRTNNLSNYTCTPVDYIRLNASKRLVDAFL 299

Query: 322 CIDGLP-----------IDKSPLYS--ESTYADIFKNRDPRMNQTILTPGGAWGGQDDGD 368
           C DG P           I  S LY+  E  YAD F+NRDPR+  T+ +PG  W G DDGD
Sbjct: 300 CTDGKPAKAGLEYYGQSIATSELYNYPEEHYADYFENRDPRLKMTVYSPGDEWPGGDDGD 359

Query: 369 ADA-TTNPIFNTPKW----NADKKGCITGTGFYFSKYVEVAAVGTVSQDSNDIHHIRYAE 423
            D  T N I+  P++    N ++ G    TGFY  KY  +   G  ++D N+I+ IRY E
Sbjct: 360 PDTDTANEIYQLPRFAVLQNNNRLGANGLTGFYLKKYNSIELAGLYNRDHNNINVIRYPE 419

Query: 424 VLLTFAEA--RLEQGTLTQTDIDNTINKLRDRVGMKRMVITELAAAGLDLRTEIRRERRV 481
           +LL +AEA   ++ GTLTQ  ID T+N+LR+RV M  M + EL A GLDL TE+ RERRV
Sbjct: 420 ILLIYAEALFNIQGGTLTQAQIDMTVNQLRERVNMHPMNLDELNAWGLDLETELHRERRV 479

Query: 482 ELALEGQRYYDILRWKQGDL-LAQDVKGMKKSL-VESFNQQYVATIATDANGYFVVNTG- 538
           E++++G RY+D+LRW++G++ L + + G    + +            TD  G  +     
Sbjct: 480 EMSMDGMRYFDVLRWEEGEIHLGKAMVGPSLEVCMNDLGANPYPDNGTDEFGDIIYEKSV 539

Query: 539 -----RKFVAPKNYLWPIPITQLQRNPVLGQNPGW 568
                  F   K+YLWP+P  +  +NP LGQNPGW
Sbjct: 540 AEGGLDHFDPSKHYLWPVPYAERIKNPDLGQNPGW 574