Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 533 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  155 bits (391), Expect = 5e-42
 Identities = 143/551 (25%), Positives = 247/551 (44%), Gaps = 56/551 (10%)

Query: 37  KGFLDREPLDSVTDISFWKTEEQLKLAANACYSNL------RNNNTIAMENMGDNTIYPP 90
           + FLD+    + +   F+  E+ L+    + + ++      R +    ++   DN     
Sbjct: 20  ESFLDKTDPTATSFTEFFNDEDDLRRVTYSSFYDVFTHHSNRRSLLYMLDGRSDNAYARD 79

Query: 91  NSEY-QAISAGNYDFTSGTLNSEWVNLYAAIRRCNHFLENYTKATNISATALAQYAGEVR 149
            S++ QAI+ G  + +S  +   +      + R N +++N  +    + T   +Y   ++
Sbjct: 80  FSDHHQAIANGTLNASSIGMEYYYATYMKHVGRLNTYIDNINEPYVENETIRTRYENILK 139

Query: 150 FLRAFMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAAAGLPTAY 209
            LR + Y  L F +GDVP +    ++ D     P   + E+LE +F      A  LP   
Sbjct: 140 GLRMWHYLRLTFYWGDVPFMLDPANLDDARQ--PARPKEEILEIIFPMAVEIAEQLPIDE 197

Query: 210 TAADLGRITKGAAFAWKARVALFFEKWSIAEAAAKSVMDLNVYQLYTAGGTAKCYNDLFT 269
             ++     + +  A   R AL+ E++ +A + AK ++D   Y L+ +      Y DLF 
Sbjct: 198 YTSNKYMFNQLSLKAVIMRYALYHERYELAASLAKEIIDSGNYSLHPS------YGDLFQ 251

Query: 270 YKGKLAGGANKETIL-----ARPNVAGVSVHNTSREIQVPDQTSRYSPTKSLVDAYLCID 324
           Y+   A   N E I+     +       S  +     +  +  S   P KSLVD+Y  + 
Sbjct: 252 YE---AASNNNEFIVHLDEESHSGSTTYSFRDLGPHFRTGNGQSYCVPLKSLVDSYWTLQ 308

Query: 325 GLPIDKSPLYSESTYA-DIFKNRDPRMNQTILTPGGAWGGQDDGDADATTNPIFNTPKWN 383
           G PI+  PL+++  Y  +   NRDPR   +I+  G  + G+   D   + NP+F   +  
Sbjct: 309 GRPIEDCPLHTKEEYELNPNLNRDPRYEASIMGHGDVFYGEPI-DIYNSNNPMFYENQ-R 366

Query: 384 ADKKGCITGTGFYFSKYVEVAAVGTVSQDSNDIHHIRYAEVLLTFAEARLEQGTLTQTDI 443
           A K      +G++F K+V  +        + +   +RYAEVLLT+AEA++  G +     
Sbjct: 367 ASK------SGYWFKKFV--SENDAFRNGNMEYGLLRYAEVLLTYAEAKIMMGEVDALTK 418

Query: 444 DNTINKLRDRVGMKRMVITELAAAGL------DLRTEIRRERRVELALEGQRYYDILRWK 497
           +  IN++R+R G+  M + ++           D  T I+ ERRVE A EG RY D+LRW+
Sbjct: 419 E-CINQVRERAGLD-MTVADVNLPSYNSYVQEDWMTLIQNERRVEFAGEGLRYADLLRWR 476

Query: 498 QGDLLAQDVKGMKKSLVESFNQQYVATIATDANGYFVVNTGRKFVAPKNYLWPIPITQLQ 557
               +A+DV           NQ  +     +      +    +  +   Y WP P + L+
Sbjct: 477 ----IAEDV----------LNQPALGHTREENGQMTSLKIEDRTFSSHQYRWPFPESSLK 522

Query: 558 RNPVLGQNPGW 568
            NP L QNPG+
Sbjct: 523 VNPGLKQNPGY 533