Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 585 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  201 bits (510), Expect = 9e-56
 Identities = 185/607 (30%), Positives = 280/607 (46%), Gaps = 100/607 (16%)

Query: 25  ALIPSFFLASCKKGFLDREPLDSVTDISFWKTEEQLKLAANACYSNLRNNN--TIAMENM 82
           AL+P   L SC+  FL+ EP+D +   +F+++E+ L+L +N+ Y          +  + M
Sbjct: 15  ALVP--ILVSCED-FLETEPVDKLVPNTFFQSEKDLELYSNSFYQRQVPGGLAVVQSDEM 71

Query: 83  GDNTIYPPNSEYQAISAGNYDFTSGTLNSEWVNLYAAIRRCNHFLENYTKATNISATALA 142
           G+ T    ++ + A +  + D   G  N      ++ +R  N+FLEN+     I   A  
Sbjct: 72  GEFTSKNQSNNFIAGAYSSVD--EGAWN------WSDLRNINYFLENFDNEV-IPQEARD 122

Query: 143 QYAGEVRFLRAFMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAA 202
            Y G  RF RA+ Y  ++  +GDVP  SKTL   D +++ PR+ R  V++ +  DLD A 
Sbjct: 123 HYEGIARFFRAYFYFDMVKRYGDVPWYSKTLSTEDPDLYKPRDPREMVIDSMLQDLDFAT 182

Query: 203 AGLPTAYTAADLGRITKGAAFAWKARVALF---FEKW--------------SIAEAAAKS 245
           + +  +        +T+  A+A+ +RV LF   + K+                A  AAKS
Sbjct: 183 SHIRDSKDNGS-SLVTRQVAYAFMSRVCLFEGTYRKYHEELGLQGTVGELLQKAADAAKS 241

Query: 246 VMDLNVYQLYTAGGTAKCYNDLFTYKGKLAGGANKETILARPNVAGVSVHNTSREIQVPD 305
           VMD   YQ+Y+ G  A  Y DLFT +  ++       +    N A    HN + +     
Sbjct: 242 VMDAQQYQIYSTGSPATDYRDLFTNENPVSEEVMWAVVY---NNALKRWHNITWKFNSAT 298

Query: 306 QTSRYSPTKSLVDAYLCIDGLPIDKSPLYSESTYADIFKNRDPRMNQTILTPGGAWGGQD 365
             +R+   K  V+ YL  DG    +   Y    +    +NRD R+ QT+ + G       
Sbjct: 299 YGNRWGLNKQFVNTYLMTDGSRFTERQGYDTIQFVREMENRDFRLAQTVRSLGYT----- 353

Query: 366 DGDADATTNPIFNTPKWNADKKGCITGTGFYFSKY-VEVAAVGTVSQDSNDIHHIRYAEV 424
               D T  P    P +        T TG++  K+ ++ + +  +S+  N I  IRYAEV
Sbjct: 354 --RLDGTPAP----PNFG------YTYTGYHILKFSLDDSRLDGISESYNSIPLIRYAEV 401

Query: 425 LLTFAEARLEQGTLTQTDIDNTINKLRDRVGMKRMVITELAAAGLDLRT----------- 473
           LL +AEA+ E G    +  + TI  LR+R G+   +    A A   L+T           
Sbjct: 402 LLNYAEAKAELGEFDASIWEQTIAPLRERAGVDSSI---PATADSYLQTVYFPSISDKFL 458

Query: 474 -EIRRERRVELALEGQRYYDILRWKQGDLL--------------AQDVKGMKK---SLVE 515
            EIRRER +EL  EG RY D+LRWK+GDL+                D+ G  K   + VE
Sbjct: 459 LEIRRERGIELCYEGFRYDDLLRWKKGDLVEMPWEGIYVPGLNQPMDLDGNGKPDVAFVE 518

Query: 516 SFNQQYVA-----------TIATDAN-GYFV--VNTGRKFVAPKNYLWPIPITQLQRNPV 561
           +  +  VA           +I T+ + G+ V   N  R+F   K YL PI  T L  NP 
Sbjct: 519 TVPESKVAGVIYFVIDGTNSILTEGDKGHIVWRANEDRQF-PDKKYLHPISNTDLVLNPD 577

Query: 562 LGQNPGW 568
           LGQNPGW
Sbjct: 578 LGQNPGW 584