Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 570 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  149 bits (375), Expect = 4e-40
 Identities = 158/593 (26%), Positives = 258/593 (43%), Gaps = 95/593 (16%)

Query: 32  LASCKKGFLDREPLDSVTDISFWKTEEQLKLAANACY--------SNLRNNNTIAMENMG 83
           LA C+  FL++ PLD +TD ++W +E  ++  +   Y        S        + +++ 
Sbjct: 15  LAGCED-FLEKPPLDDLTDETYWSSENNVRSFSWGFYTAYFSGYGSGYAWGKFFSGQSLN 73

Query: 84  DNTIYPPNSEYQAISAGNYDFTSGTLNSEWVNLYAAIRRCNHFLENYTKATNISATALAQ 143
           D+  + P S  Q       +  +    S W   +A +R+ N FL N  +   +   A+  
Sbjct: 74  DD--FGPTSPAQF----RQNIPTAATGSYWT--FAWVRKANIFL-NRIQTVPMDEEAINH 124

Query: 144 YAGEVRFLRAFMYTYLIFLFGDVPLLSKTL-DIGDEEVFGPRNKRAEVLEFVFADLDAAA 202
           ++G  RF RA  Y  L+  FGDVP     L +  +E+++ PR+ R+ V++ V  DL  AA
Sbjct: 125 WSGVARFFRAMEYHDLVKQFGDVPWYDHELEETNEEDLYRPRDPRSFVMDRVLEDLQFAA 184

Query: 203 AGLPTAYTAADLGRITKGAAFAWKARVALFFEKW------------SIAEAAAKSVMDLN 250
             +        L  + +     + +R+ L+   W            +  EAA  +  ++ 
Sbjct: 185 DNVRQVDGDPGLS-VNRDVVLGFMSRIMLYEGTWQKYHEGNTEKAKAYLEAAKWAANEMI 243

Query: 251 VYQLYTAGGTAKCYNDLFTYKGKLAGGANKETILARPNVAGVSVHNTSREIQVPDQTSRY 310
               Y+ G     Y ++FT    L    N E IL R    G+  H  +       QT   
Sbjct: 244 STGNYSLGD----YREVFT---SLNLSGNPEVILYRHYEPGLVTHALNSYNNKEPQT--- 293

Query: 311 SPTKSLVDAYLCIDGLPIDKSPLY-SESTYADIFKNRDPRMNQTILTPGGAWGGQDDGDA 369
             +K  V+ YL  DGLP+  SPLY  +    ++  NRD R+  T+++      G      
Sbjct: 294 GVSKDAVETYLASDGLPVGLSPLYQGDRGIQNVMANRDGRIYGTLVSDELRLNGIQSN-- 351

Query: 370 DATTNPIFNTPKWNADKKGCITGTGFYFSKYVEVAAVGTVSQDSNDIHHIRYAEVLLTFA 429
                  ++T  +   K         + ++ ++    G+ + +  D   +RY EVL+ +A
Sbjct: 352 -------YSTTGYATLK---------FLNEEIKDDPEGSSNLNYTDSPVLRYGEVLMNYA 395

Query: 430 EARLEQGT-----LTQTDIDNTINKLRDRVGMKRMVITELA-AAGLD------------- 470
           EA  E  T     LTQ D+D +IN LRDR G++   +T +  A G++             
Sbjct: 396 EAVAELATVGGPALTQADLDMSINVLRDRPGVEMPHLTLVGNAPGVNGVAYDDPERDPDV 455

Query: 471 --LRTEIRRERRVELALEGQRYYDILRWKQ---GDLLAQD--VKGMKKSLVESFNQQYVA 523
             L  EIRRERR+EL +EG R  D+ RW++    D  A +   +G      +  + Q   
Sbjct: 456 PSLLWEIRRERRIELMMEGFRLDDLKRWEKLEYSDTEANENINRGAWIDKADYPDLQSSV 515

Query: 524 TIATDANGYFVVNTG----RKFVAPKNYLWPIPITQL----QRNPVLGQNPGW 568
            +    +GY +  T     R+F  PK YL PIP+ Q+    +    L QNPGW
Sbjct: 516 ILTDGESGYIIPATAAASQRRFEDPKVYLDPIPLDQITLYEEHGVTLEQNPGW 568