Pairwise Alignments

Query, 568 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 620 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  150 bits (378), Expect = 2e-40
 Identities = 151/619 (24%), Positives = 258/619 (41%), Gaps = 98/619 (15%)

Query: 30  FFLASCKKGFLDREPLDSVTDISFWKTEEQLKLAANACYSNLRNN--NTIAMENMGDNTI 87
           + L+SC   F++  PLD V++   W      + A    Y  L     +   + ++ D  I
Sbjct: 18  WILSSCNADFVNTSPLDEVSEEDVWSDPALAEAAVTGTYVGLGQGGFDEQMLASLTDEAI 77

Query: 88  YP-PNSEYQAISAGNYDFTS-GTLNS--EWVNLYAAIRRCNHFLENYTKATNISATALAQ 143
           +  P  +   I+    +  + G +N+  EW N+Y+ IR CN  +EN T+        + +
Sbjct: 78  FTHPGRDITVITESRSNPAAPGWINNTLEWGNMYSYIRACNVAIENLTEPLLTDQDLVDR 137

Query: 144 YAGEVRFLRAFMYTYLIFLFGDVPLLSKTLDIGDEEVFGPRNKRAEVLEFVFADLDAAAA 203
             GE +F+RA+    L+  +G  P++ +  ++G+E    PRN   E + F+  DLD AAA
Sbjct: 138 LMGEAKFMRAYYSHQLLRYYGGFPIVDRAYELGEESYEIPRNTWEECINFIVGDLDEAAA 197

Query: 204 GLPTAYTAADLGRITKGAAFAWKARVALF------------------------------- 232
            L     + D GR ++ AA A K+RV L+                               
Sbjct: 198 LLEG--KSMDSGRASRMAALALKSRVLLYAASDLHDIPTASSNSSLISGYANPEYLGYTS 255

Query: 233 ---FEKWSIAEAAAKSVMDLNVYQLYTAGGTAKCYNDLFTYKGK--LAGGANKETILARP 287
                +W  A+ AAK+V+D +   L    G       +  Y        G  +E I AR 
Sbjct: 256 GDRMSRWQRAKDAAKAVLDNDQGNLLNLSGPVSHEEGIQNYMNNSLSKNGGEEELIFARY 315

Query: 288 NVAGVSVHNTSRE--IQVPDQTSRY---SPTKSLVDAYLCIDGLPID-KSPLYSESTYAD 341
            +      N  R+     P+  + +   +P +  VD Y  +DG   D  +P ++E+ Y  
Sbjct: 316 FI-NAKQENGGRQGLFNGPNGYNNWAGNTPIQHFVDDYEMMDGTEFDWDNPEHAEAPY-- 372

Query: 342 IFKNRDPRMNQTILTPGGAWGGQDDGDADATTNPIFNTPKWNADKKGCI----------- 390
             +NRD R   ++L  G  W  +   +          T ++   + G +           
Sbjct: 373 --ENRDARFYASLLYDGAQWKPRSSANQPKDPLGQIQTGQYEIMQNGSVGTHFGLDTRNS 430

Query: 391 -------TGTGFYFSKYV--EVAAVGTVSQDSNDIHHIRYAEVLLTFAEARLEQGTLTQT 441
                  + TG+YF K++  + + V   +        +RY E +L + EA +E G   + 
Sbjct: 431 SIEDWNGSYTGYYFRKFIDPDPSIVDQNTWQEIPWPFLRYTEAVLNYVEACIELG--QEE 488

Query: 442 DIDNTINKLRDRVGMKRMVITELAAAGLDLRTEIRRERRVELALEGQRYYDILRWKQGDL 501
           +    +N++R RVGM       +  +G  L    R ERR+E+A E QRY+D  RW    +
Sbjct: 489 EARTWLNRIRYRVGM-----PAINDSGEALVERYRNERRIEMAYEEQRYHDCRRW----M 539

Query: 502 LAQDVKGMKK---SLVESFN-------QQYVATIATDANGYFVVNTGR--KFVAPKNYLW 549
           + ++  G K    ++V +F         +Y   I   +     ++ G+  +    K Y  
Sbjct: 540 IPEETLGRKANGINVVGTFKPGQSLDLYRYDPEIYNYSYEVTPIDPGKEDRQWLDKMYYL 599

Query: 550 PIPITQLQRNPVLGQNPGW 568
           PI   ++ RN  L QNPG+
Sbjct: 600 PIHFNEMNRNAKLVQNPGY 618