Pairwise Alignments

Query, 167 a.a., RNA polymerase subunit sigma from Pedobacter sp. GW460-11-11-14-LB5

Subject, 201 a.a., RNA polymerase sigma factor from Rhizobium sp. OAE497

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 7/152 (4%)

Query: 10  VTAHTDQLYAHAMNFTRDTEDANDLVQDTLIKALRFKEGFEQGSNFKGWLFVIMRNTFIN 69
           +T H  +L+ + +  +R  + A DLVQ T ++AL     FE G+    WLF I+ + ++N
Sbjct: 45  LTEHLSRLWRYGLVLSRKRDVAEDLVQQTCVRALERAAQFEPGTRLDRWLFSILHSIWLN 104

Query: 70  DYR-KKAKKNSIITIEEELSSAQLAGNASLNGAEHKFAMQDINNALHRLPEAHR-LPFVR 127
           + R  K ++       EE      AG       E   A   +   +  LPEA R   F+ 
Sbjct: 105 EIRASKVRQGQGFADAEEALVFDGAG-----ATETHVAAAQLLRKVDALPEAQRSAVFLA 159

Query: 128 YVEGYKYHEIADELGIPLGTVKTHIHQARLEL 159
           YVEG  Y E+A+ L IP+GTV + +  AR  L
Sbjct: 160 YVEGLAYREVAEILNIPIGTVMSRLAAARARL 191