Pairwise Alignments

Query, 167 a.a., RNA polymerase subunit sigma from Pedobacter sp. GW460-11-11-14-LB5

Subject, 167 a.a., RNA polymerase sigma factor from Phocaeicola dorei CL03T12C01

 Score =  122 bits (307), Expect = 2e-33
 Identities = 59/164 (35%), Positives = 99/164 (60%)

Query: 1   MKTATFSNMVTAHTDQLYAHAMNFTRDTEDANDLVQDTLIKALRFKEGFEQGSNFKGWLF 60
           M + +F   +    ++L   A   T D E+ANDL+Q+T +KAL  ++ +   +NFKGW++
Sbjct: 1   MNSVSFKKNLLGVQEELLRFAYKLTADREEANDLLQETSLKALDNEDKYIPDTNFKGWMY 60

Query: 61  VIMRNTFINDYRKKAKKNSIITIEEELSSAQLAGNASLNGAEHKFAMQDINNALHRLPEA 120
            IMRN FIN+YRK  +  + +   + L    +  ++  +  E  + M++I+  +  LP+ 
Sbjct: 61  TIMRNIFINNYRKIVRDQTFVDHTDNLYHLSMPQDSGFDSTEGAYDMKEIHRIVGLLPKE 120

Query: 121 HRLPFVRYVEGYKYHEIADELGIPLGTVKTHIHQARLELKKTLK 164
           +R+PF  +V G+KY EIA++LG+PLGTVK+ I   R  L+  L+
Sbjct: 121 YRIPFAMHVSGFKYREIAEKLGLPLGTVKSRIFFTRQRLQGQLR 164