Pairwise Alignments

Query, 396 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 426 a.a., conjugative transposon protein TraM from Phocaeicola dorei CL03T12C01

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 24/177 (13%)

Query: 229 FNTIS--VREKQQ-LITAIIDEDITGYSGSRIRLRLLEEVYAGKSLLTKGTYLY--ARIS 283
           FNT+   +RE ++  I A + + +T   G  +  RLLE + AG  L+  GT +   ARI+
Sbjct: 258 FNTVGSDLREPERNSIRAAVQQTVTLTDGGEVTFRLLEPMMAGDLLIPSGTPVTGAARIN 317

Query: 284 GFSEQRVQLEINSVHCAGKILPVKLLLYDLDGLPGSYVPAS----AFREFSKGLGASSVQ 339
           G   +R+ +++++V   G ++PV L +YD +G  G  VP S    A +E +  +GA    
Sbjct: 318 G---ERLTVKVSAVQHGGAVVPVDLSVYDTNGNEGIPVPGSEELNAVKEIAANMGAG--- 371

Query: 340 GFNTMGSAL----DQNEFVMSTASR-LFQSTSSAIANMVRKNRAKLKYNNQVFLVDP 391
               MGS++    D    ++S   R   Q  S  ++  +R  +  LK    V L+ P
Sbjct: 372 ----MGSSITITDDAGSQLLSDLGRSAIQGVSQYVSKKMRSVKVTLKAGYSVLLLPP 424