Pairwise Alignments

Query, 452 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Pedobacter sp. GW460-11-11-14-LB5

Subject, 454 a.a., GTPase and tRNA-U34 5-formylation enzyme TrmE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  266 bits (681), Expect = 8e-76
 Identities = 159/459 (34%), Positives = 264/459 (57%), Gaps = 12/459 (2%)

Query: 1   MNNQDTIIALSTPSGSGAIGVIRLSGPEAISLTNAVFAGKDLEKQASHTLHFGLVKDGD- 59
           M++ DTI+A +TP G G +G++R+SG +A  +   V  GK  + + +  L F   KD D 
Sbjct: 1   MSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVL-GKLPKPRYADYLPF---KDVDG 56

Query: 60  HIVDEVVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLIS-KGARAAKPGEFTLRAF 118
             +D+ +A  F  P S+T E+V+E+  HG   I+  ++  +++  G R A+PGEF+ RAF
Sbjct: 57  SALDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAF 116

Query: 119 LNGAFDLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELDF 178
           LN   DL+QAEA+ADLI ++S+ +   A+  ++G F+  +  L E L H    +E  +DF
Sbjct: 117 LNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDF 176

Query: 179 AEEDVEFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNAL 238
            +E+++F +  +++  +N +   L  + +    G++++ G+ +VIAG+PN GKS+LLNAL
Sbjct: 177 PDEEIDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNAL 236

Query: 239 LNEERAIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQA 298
              E AIV+DIAGTTRD + + + I G+    IDTAG+RD +D +E +G+ER  ++++QA
Sbjct: 237 AGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQA 296

Query: 299 KLIIYMADA----AQSISEIEEQIRGLKQLAIPYLILVNKADLMADAQR-KAFEALEVVF 353
             +++M D     A   ++I           +P  ++ NKAD+  +           +V 
Sbjct: 297 DRVLFMVDGTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGISEVNGHSLVR 356

Query: 354 ISAKEKQGIDELKTTLLEQVNLHHINTSETLVTNIRHVEALKQTEHALQRVLANVDNPVT 413
           +SA+  +GID L+  L + +     N     +   RH++AL +    L++  A +     
Sbjct: 357 LSARTGEGIDVLRNHLKQSMGF-DTNMEGGFLARRRHLQALAEAAEHLEQGKAQLLGAWA 415

Query: 414 SDFLAMDIKQALHYLGEITGTVTTDDLLENIFTKFCIGK 452
            + LA +++ A   L EITG  T+DDLL  IF+ FCIGK
Sbjct: 416 GELLAEELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK 454