Pairwise Alignments

Query, 452 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Pedobacter sp. GW460-11-11-14-LB5

Subject, 442 a.a., tRNA modification GTPase from Agrobacterium fabrum C58

 Score =  223 bits (569), Expect = 7e-63
 Identities = 161/460 (35%), Positives = 247/460 (53%), Gaps = 29/460 (6%)

Query: 2   NNQDTIIALSTPSGSGAIGVIRLSGPEAISLTNAVFAGKDLEKQASHTLHFGLVKDGDHI 61
           ++ DTI ALS+ +    + VIR+SG +A     A+  G+DL    + +L   +    + I
Sbjct: 3   DSADTIYALSSGALPAGVAVIRISGAKAFIALRAL-TGRDLPLPRTASL-CSIRNRNNEI 60

Query: 62  VDEVVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLISKGA-RAAKPGEFTLRAFLN 120
           +D+ +  +F AP S+T EN VEI  HGS  ++  I   L + G  R A  GEF+ RAF N
Sbjct: 61  IDQSLVIVFPAPNSFTGENCVEIHSHGSRAVMASIFAELDNLGGLRPADAGEFSRRAFEN 120

Query: 121 GAFDLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELDFA- 179
           G  DL + E +ADL+ + ++    +A++Q  G  +    G   +L    ++IE ELDFA 
Sbjct: 121 GKMDLLEVEGLADLLQAETEMQRRLAVEQSSGQLSALYDGWANRLTRARALIEAELDFAD 180

Query: 180 EEDVEFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNALL 239
           EEDV  +   Q+   +  +   +   +     G +I++G  + + G+PN GKSTLLNAL 
Sbjct: 181 EEDVPDSVATQVWEAMAALKGEINAHLQGGGNGEIIRDGFKVALVGEPNAGKSTLLNALS 240

Query: 240 NEERAIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQAK 299
             E AIV+DIAGTTRD +  ++ + G + R  DTAGIR+T D++E  GV R +   + A 
Sbjct: 241 GREVAIVTDIAGTTRDVLSVDINLDGYLVRIFDTAGIRETQDVVEREGVRRAVLTAETAD 300

Query: 300 LIIYMAD----AAQSISEIEEQIRGLKQLAIPYLILVNKADLMADAQRKAFEALEVVFIS 355
           LI+ + D      QSI   + Q R L+        +  K  L + A    F+    + IS
Sbjct: 301 LILILQDNDSTPKQSIGSFDNQ-RSLR--------VRTKTLLRSRASDDDFD----LSIS 347

Query: 356 AKEKQGIDELKTTLLEQVNLHHINTSETLV-TNIRHVEALKQTEHALQRVL--ANVDNPV 412
           AKE  G+DEL+  L  ++    + + +TLV    RH + L++T + +   L    +D  +
Sbjct: 348 AKEGIGLDELRRALKREIE-KRVGSGQTLVPARARHKKRLEETLNYVSDALDSETLDLAI 406

Query: 413 TSDFLAMDIKQALHYLGEITGTVTTDDLLENIFTKFCIGK 452
            S++L +    A   LG ITG V  +DLL  IF++FCIGK
Sbjct: 407 RSEYLRL----AATSLGRITGRVDVEDLLGVIFSEFCIGK 442