Pairwise Alignments

Query, 374 a.a., AI-2E family transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 352 a.a., Putative permease PerM (= YfgO) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 82/335 (24%), Positives = 160/335 (47%), Gaps = 34/335 (10%)

Query: 15  LLGLMAIVAVMVIGRDIIMPMLMAFFISIML-LPVYRFLK---RKRIPESLAIILSI--- 67
           L+ L+A  +++     ++ P+L+A  ++ +L  P  R       +R   S+ +IL +   
Sbjct: 19  LVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQAIGCSRRWAASIVLILFVGIL 78

Query: 68  LLVALFVALIVWFFSNQIGI-LVKDFPQIKSNVTQHINSLSDWISRITH-YDDKQQKAFI 125
           LL+A  V  I W    Q GI L++D P +       +N LSD+ + +   Y        I
Sbjct: 79  LLMAFVVMPIAW----QQGIYLIRDMPGM-------LNKLSDFAATLPRRYPALMDAGII 127

Query: 126 QTKSDDL----MNMGTSLAGGAAVTLSGIF---VFIGLLPIYIYLMLFYKDILLRFIFMW 178
              ++++    +NMG S+   +  +L G+    V++ L+P+ ++ ++  K+ +L  +   
Sbjct: 128 DAMAENMRTRMLNMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDKEQMLNAVRRV 187

Query: 179 FKTDDHPKVKEAIYETESIIKSYLIGLLIQITYMTILLGGILMLIGIKHALLIGVIFAIL 238
              +      +   E    I +Y+ G ++++  + +      +L G+ ++LL+ V+    
Sbjct: 188 LPRN-RGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFS 246

Query: 239 NLIPYVGALIGNL--IGV-LLTLTSSQELWPVITVLGVIAFVQFLDNNILMPRIVGSKVK 295
            LIPY+GA +  +  +GV L       E W   +   V   +Q LD N+L+P +    V 
Sbjct: 247 VLIPYIGAFVVTIPVVGVALFQFGLGTEFW---SCFAVYLIIQALDGNLLVPVLFSEAVN 303

Query: 296 INALFAILGVFIGGSIAGVSGMFLALPIVAVLKII 330
           ++ L  IL V I G + G  G+F A+P+  ++K +
Sbjct: 304 LHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAV 338