Pairwise Alignments

Query, 966 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1024 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  509 bits (1311), Expect = e-148
 Identities = 313/927 (33%), Positives = 488/927 (52%), Gaps = 50/927 (5%)

Query: 79   DHDVPVLFGTQKNVKRIQSSATVSGEELKSFPTPQVGLMLYGKLPGLYVVQNNFQLGSDE 138
            D  V V FG QK      + A++  +EL   P   +   L G+LPGL  VQ++ + G D+
Sbjct: 109  DEVVVVGFGEQKKATMTGAVASIGDKELVQSPVANISNSLVGRLPGLIAVQSSGEPGYDQ 168

Query: 139  PAISLRG---------RTPLVVIDGVPRSYLS-IDPEQIESISVIKDALGTALYGMKAAD 188
             ++ +RG           PL+++DGV RS L+ IDP +IE++S++KDA  TA++G++ A+
Sbjct: 169  SSLKIRGIATLNTGAESDPLILVDGVQRSNLNQIDPHEIETLSILKDASATAVFGVRGAN 228

Query: 189  GMLLITTKRGANMPKQITFTSQYGIQQQIERPKFLDAFNYATLFNEALANDGRQAIYTAA 248
            G++LITTK G+    +I +T+ +G+Q     P  LD++ YA L NEA  N G++  ++ +
Sbjct: 229  GVILITTKTGSKGKPEINYTANFGLQSPNSLPDLLDSYQYAMLRNEASVNSGQEPYFSES 288

Query: 249  DLDKYKNGTNPFTHPNVNWTDEILKATAPVSRQNLNLRGGSNKVRYFVDLDYLSQSGFLV 308
             L+ Y+NG +P+ HPNV+W D +LK  +   + N N+ GG++  RYFV L Y  Q+G   
Sbjct: 289  SLELYRNGGDPYFHPNVDWFDLVLKDYSAQQQHNFNISGGTDNTRYFVSLGYFDQNGAYD 348

Query: 309  TDPSINTYETNNSFKRYSFRSNIDVDLTNSTTLSLSLFGRIRNSNQPGSTIASIYSTLLT 368
                   Y  N  FKRY+FRSN D+D     + S+ L G+  +SN PG     I+  +L 
Sbjct: 349  VQDVQTAYSANPKFKRYNFRSNFDIDFNKDFSASVKLSGQFTDSNYPGYGAGEIFFRIL- 407

Query: 369  TPNNAYPKFNE---NGSLGGNTEFQNNLYGMS----IKSGYRPSVNRNLGADVSLMQKLD 421
               N+ P  N    +G L    E   +  G      + +GY+ +    +  +VSL  KL 
Sbjct: 408  ---NSNPMMNPGVIDGKLISGVEGLPSSSGSPLDAIVNNGYQRNFGSTMNTNVSLKHKLG 464

Query: 422  TFLPGLYASGAISFNSYYNENINRSKSFAVYSPVINPV-TNQTSYKTIGGDGTQSNSSSP 480
                GL   G +++++YY  N++RSK    Y  V +P    Q  +   G D   S   S 
Sbjct: 465  FITEGLSVRGMVAYDNYYQHNVSRSKESMKYRIVKDPEDPTQPVFLPQGMDAPFSFGES- 523

Query: 481  TDLNQQIFSRFDLGYDKTIDKNTFKAQLLFIRDSYVLGGALSQV---NQSLGGRFNYDYD 537
               N++ +    + Y ++  ++      L++++ Y   G    V    Q L GR  Y++ 
Sbjct: 524  YGRNRKTYFEGAVDYSRSFGQHNITGMALYMQERYTAPGQEYNVPRGYQGLVGRVTYNFK 583

Query: 538  NKYLLELATSYMGYDRYKAGDQWGFFPSVGLGWNIASESFFANLKNTVNSLKLRTSYGLT 597
             KYL E    Y G + +  G ++GFFPS  LGW +  ESF     + ++ +K+R SYG  
Sbjct: 584  EKYLSEFNMGYNGSENFPEGKRFGFFPSFSLGWVLTEESFIPT-GDFLSYVKIRGSYGEV 642

Query: 598  ATNAAAG-YFQYLQN--FDNGDTF----YSRNPLTTSSTKDEGPLANPNITWEKAKKFNI 650
              +   G  F YL +  + N   +    Y  N    S ++ EG + NP++TWE+AKKFN+
Sbjct: 643  GNDKIGGARFLYLPSVFYPNSGGYHFGQYGDNYQWYSGSQ-EGRVGNPDVTWERAKKFNL 701

Query: 651  GLDVSMLKDKVWLTADYYRNSYYDLLQTRRTNASAVIGAVLPPENIGKNQYSGIELGLGY 710
            G++     DK+ + AD +     ++L    T    ++ A LPP NIGK +  G EL + +
Sbjct: 702  GIETGFFGDKLRINADIFAEKRDNILWYLGT-VPDLVQADLPPVNIGKVENKGFELEVNF 760

Query: 711  QNQINNFRYFITANGSWSASKVIFNDEPFRKNAYEYRTGQPVGQTFGYVADGFYNNTAEI 770
             +QI  F+Y++ +N S + +K+++ DEP R + +  RTG PVGQ +G  +DGFYN   E+
Sbjct: 761  NDQIGEFKYWVKSNYSLAKNKILYMDEPNRAHEWLQRTGHPVGQYWGLQSDGFYNTEEEL 820

Query: 771  NNGP--KVDGYLPVPGDLKYKDLNNDGIINTYDMTAIGSTK-PVFFYGLTGGINYKGLDF 827
             + P       L V GD++Y D N+DG I+ YD   IG++  P   YGL+ G  YKG DF
Sbjct: 821  ASAPTSAFTAELQV-GDIRYVDQNDDGTIDQYDEVPIGNSNFPQVIYGLSFGGQYKGFDF 879

Query: 828  SFTLNGKANRNVYFNFINFASTGAAGGYGQALESSLLRWTPATASQ---AEYPR--LSVG 882
            S    G    + Y +     +      +  A    L RWT     Q     YPR  LS  
Sbjct: 880  SVLFQGADRVSTYID--QMGAWAFDTDWRNATSRHLERWTQERYEQNLPISYPRVELSPT 937

Query: 883  NNPNNSQVSSFWVKNGNYLRLRNVEIGYSLPGHLIKLIGLTNVRVFANGLNLLTATTLDG 942
            +  +N + S FW+++ +Y+RL+N EI Y+     +  +G+TN+RVFANG NLLT + +  
Sbjct: 938  SGKHNYRPSDFWLEDASYIRLKNAEIAYNFQSRFLNRLGVTNLRVFANGNNLLTWSDMVN 997

Query: 943  VDPEVLIGN---VPNQRIFNFGVNLQF 966
             DPE   G     P  R++N G+N++F
Sbjct: 998  FDPEAPAGRGGFYPQMRVYNLGLNVRF 1024